Gene Information

Name : fepD (B21_00546)
Accession : YP_002998397.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012892
Putative virulence/resistance : Virulence
Product : fepD, subunit of ferric enterobactin ABC transporter and Ferric Enterobactin Transport System
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 581666 - 582670 bp
Length : 1005 bp
Strand : -
Note : -

DNA sequence :
ATGTCTGGTTCTGTTGCCGTGACACGCGCCATTGCCGTGCCCGGATTGCTGTTATTACTGATTATCGCGACGGCATTAAG
CCTGCTCATTGGGGCAAAATCACTCCCCGCTTCCGTAGTGCTGGAGGCCCTCTCCGGCACCTGCCAGAGCGCCGACTGCA
CCATCGTGCTCGACGCGCGACTGCCGCGCACCCTTGCCGGTTTACTTGCAGGCGGCGCGCTTGGCCTTGCCGGGGCGTTG
ATGCAAACCCTCACCCGAAATCCACTTGCCGACCCCGGCTTGCTTGGCGTGAACGCCGGAGCCAGCTTTGCCATTGTGCT
GGGTGCGGCGCTGTTTGGTTACTCATCCGCGCAGGAACAACTGGCGATGGCCTTCGCCGGGGCGCTGGTGGCCTCGTTGA
TTGTTGCCTTTACCGGCAGCCAGGGCGGCGGGCAGTTAAGTCCGGTGCGTTTAACCCTGGCGGGCGTGGCGCTGGCGGCG
GTGCTGGAAGGGCTGACCAGCGGCATCGCCCTGCTTAATCCTGACGTCTACGATCAACTGCGTTTCTGGCAAGCCGGTTC
GCTGGATATTCGTAATCTGCACACCTTAAAAGTGGTGCTGATCCCGGTGCTGATCGCCGGAGCAACTGCGCTATTACTGA
GTCGCGCGCTGAACAGTTTAAGCCTTGGCAGCGACACCGCGACGGCGCTGGGCAGTCGCGTGGCGCGCACACAGTTGATT
GGTCTGCTGGCGATTACCGTGCTTTGTGGTAGTGCGACGGCGGTAGTTGGCCCGATTGCCTTTATTGGCCTGATGATGCC
GCACATGGCGCGCTGGCTGGTAGGTGCCGATCATCGCTGGTCGCTGCCCGTCACGCTACTCGCCACCCCTGCCCTGCTGC
TGTTTGCCGATATCATCGGGCGGGTGATTGTGCCCGGCGAGTTGCGCGTTTCTGTGGTCAGTGCGTTTATTGGTGCACCG
GTGCTAATCTTCCTCGTGCGACGTAAAACGCGAGGTGGTGCATGA

Protein sequence :
MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEALSGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGLLGVNAGASFAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALNSLSLGSDTATALGSRVARTQLI
GLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAP
VLIFLVRRKTRGGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-27 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-27 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-27 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-27 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD YP_002998397.1 fepD, subunit of ferric enterobactin ABC transporter and Ferric Enterobactin Transport System VFG0926 Protein 2e-102 99