Gene Information

Name : insM_AB (B21_04521)
Accession : YP_006094328.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012892
Putative virulence/resistance : Unknown
Product : IS600 orfAB' transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4421177 - 4422333 bp
Length : 1157 bp
Strand : -
Note : -

DNA sequence :
ATGAGCAGAAAAACCCAACGTTACTCTAAAAAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGGCGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGAGATATATTAAAAAAAGCAACTGTAGATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAATCGAACAATGGCGACAA
CAATTTCCCATTGAAGCGATGTGTCAGGTATTTGGTGTATCCAGGAGCGGTTATTACAACTGGGTACAGCATGAACCCTC
AGACAGAAAACAAAGTGATGAGCGGCTAAAACTGGAGATTAAGGTGGCACATATCCGCACTCGCGAAACATATGGAACCC
GGCGGCTCCAGACGGAGCTGGCAGAGAATGGCATCATCGTTGGTCGTGACCGACTGGCACGTCTTCGTAAGGAGCTAAGG
CTACGCTGTAAGCAGAAACGCAAGTTCAGAGCGACTACGAACTCGAACCACAATCTGCCAGTTGCGCCAAATCTGCTGAA
CCAGACGTTCGCTCCTACAGCACCAAATCAGGTCTGGGTGGCGGACCTGACGTATGTTGCCACACAGGAGGGATGGTTGT
ACCTCGCTGGCATCAAAGATGTTTATACGTGCGAAATTGTCGGCTACGCCATGGGAGAGCGCATGACAAAAGAGCTGACA
GGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCCACCTGCCGGGCTAATCCACCACTCTGATCGAGGTTCACAGTA
CTGCGCATACGATTACCGGGTCATACAGGAGCAGTTTGGTCTGAAAACATCAATGTCGCGTAAAGGTAACTGTTACGACA
ACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAGAGCCTGAGCCACTATCGTTTTAATAACCGGGATGAAGCC
ATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAGCGTCGTCACTCTCGTCTGGGGAATATCTCCCCGGC
AGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTAA

Protein sequence :
MSRKTQRYSKKFKAEAVRTVLENQLSISEGASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKSNCRFCTGVAEKYALIEQWRQQFPIEAMCQVFGVSRSGYYNWVQHEPSDRKQSDERLKLEIKVAHIRTRETYGT
RRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKFRATTNSNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWL
YLAGIKDVYTCEIVGYAMGERMTKELTGKALFMALRSQRPPAGLIHHSDRGSQYCAYDYRVIQEQFGLKTSMSRKGNCYD
NAPMESFWGTLKNESLSHYRFNNRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-115 99
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 5e-115 99
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 1e-114 99
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-113 99
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 1e-114 99
unnamed AAF09022.1 unknown Not tested SHI-O Protein 4e-114 99
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 6e-115 99
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 9e-115 99
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-115 99
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-44 42
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 2e-44 42
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 2e-44 42
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 2e-44 42
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 4e-45 42
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 2e-45 42
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 6e-45 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
insM_AB YP_006094328.1 IS600 orfAB' transposase VFG1706 Protein 3e-115 99
insM_AB YP_006094328.1 IS600 orfAB' transposase VFG1631 Protein 1e-44 42