Gene Information

Name : ybl123 (B21_02760)
Accession : YP_003000524.1
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012892
Putative virulence/resistance : Unknown
Product : ybl123
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2941395 - 2942354 bp
Length : 960 bp
Strand : +
Note : -

DNA sequence : 
ATGGCACTGACTGACGCAAAAATTCGGGCTGCAAAGCCCACTGACAAGGCGTATAAACTCACTGACGGAGCTGGCATGCT
CATGCTGGTACATCCCAATAGTTCCCGTTACTGGCGTCTCCGTTATCGTATTTTGGGTAAGGAGAAGACTCTTGCACTTG
GTGTGTATCCAGAAGTTTCTCTCTCCGAAGCTCGTGCAAAACGGGATGAGGCCCGAAAACTAATTTCGGCGGGGATTGAC
CCTTGCGAACAGAAAAGAGCTAAAAAAGTAGTCCCTGATTTACAGCTCTCTTTTGAACATATTGCACGACGCTGGCATGC
CAGTAATAAACAATGGACACAATCACACAGCGATAAAGTACTCAAAAGCCTCGAGACGCATGTTTTCCCTTTTATCGGCA
ACCGGGATATCACAAAACTCAACACTCCGGACCTGCTTATCCCAGTTCGCGCTGCAGAGGCTAAACAGATTTATGAAATC
GCCAGTCGTCTGCAGCAAAGGATATCTGCTGTAATGCGTTATGCCGTACAGTCTGGCATCATCAGATATAATCCTGCTCT
GGATATGGCTGGCGCATTGACCACTGTAAAACGCCAGCATCGCCCCGCTCTTGATCTTTCACGTCTTCCTGAACTTCTGT
CCCGTATTGGCAGTTATAAAGGTCAGCCTGTTACCCGACTTGCTGTTATGCTGAATTTACTGGTTTTTATTCGCTCCAGT
GAACTCAGATATGCCCGCTGGTCAGAAATTGATATTGAAAATGCCATGTGGACTATTCCTGCTGAACGCGAGCCTCTGCC
AGGCGTAAATTTCTCGCACCGGGGTTCCAAGATGAGAACTCCGCATCTTGTTCCCCTCAGCAAGCAGGCTGTACCTTCCC
TTCCTCCTGCATTTCCTGTCAGAATGACTGTACAGCGCGCAGATTGCCTTTTTATTGACCACCTTAATATACCATTATAA

Protein sequence : 
MALTDAKIRAAKPTDKAYKLTDGAGMLMLVHPNSSRYWRLRYRILGKEKTLALGVYPEVSLSEARAKRDEARKLISAGID
PCEQKRAKKVVPDLQLSFEHIARRWHASNKQWTQSHSDKVLKSLETHVFPFIGNRDITKLNTPDLLIPVRAAEAKQIYEI
ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGSYKGQPVTRLAVMLNLLVFIRSS
ELRYARWSEIDIENAMWTIPAEREPLPGVNFSHRGSKMRTPHLVPLSKQAVPSLPPAFPVRMTVQRADCLFIDHLNIPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AAL51003.1 CP4-like integrase Not tested LEE Protein 1e-132 96
ECO111_3718 YP_003236059.1 putative integrase Not tested LEE Protein 1e-130 95
ORF_1 AAZ04412.1 phage integrase Not tested PAI I APEC-O1 Protein 1e-132 95
c5216 NP_757064.1 prophage P4 integrase Not tested PAI II CFT073 Protein 8e-133 95
APECO1_3534 YP_854214.1 P4-like integrase Not tested PAI I APEC-O1 Protein 2e-132 95
int AAK16198.1 Int Not tested PAI-I AL862 Protein 1e-132 95
ECO103_3550 YP_003223418.1 integrase Not tested LEE Protein 8e-133 95
int ADD91747.1 P4 integrase Not tested PAI-I AL862 Protein 1e-132 95
ECO26_5300 YP_003232178.1 integrase Not tested LEE Protein 8e-133 95
int-phe AAL57571.1 CP4-like integrase Not tested LEE Protein 6e-133 95
int AAL51028.1 CP4-like integrase Not tested LEE Protein 6e-133 95
Z4313 NP_289539.1 pathogenicity island integrase Not tested OI-122 Protein 5e-132 95
int-phe AAL60261.1 Int-phe Not tested LEE Protein 6e-133 95
intP4 CAE85151.1 CP4 integrase protein Not tested PAI V 536 Protein 3e-132 95
int AAT48697.1 CP4-like integrase Not tested PAI I 4787 Protein 1e-132 95
SF2964 NP_708738.1 P4-type integrase Not tested SHI-1 Protein 2e-132 94
S4822 NP_838459.1 P4-type integrase Not tested SHI-1 Protein 2e-132 94
ECUMN_3322 YP_002414004.1 integrase Not tested Not named Protein 5e-130 94
c3556 NP_755431.1 prophage P4 integrase Not tested PAI I CFT073 Protein 1e-131 94
int2 NP_993013.1 integrase Not tested HPI Protein 3e-63 50
int CAA21384.1 - Not tested HPI Protein 3e-63 50
int CAA08754.1 integrase Not tested HPI Protein 2e-63 50
int CAB59974.1 integrase Not tested HPI Protein 3e-64 50
int YP_002346908.1 integrase Not tested HPI Protein 3e-63 50
y2393 NP_669700.1 prophage integrase Not tested HPI Protein 3e-63 50
unnamed AAD17660.1 unknown Not tested HPI Protein 4e-62 49
int AAD44730.1 Int Not tested SHI-2 Protein 2e-62 44
int CAC39282.1 integrase Not tested LPA Protein 3e-63 44
aec33 AAW51716.1 Int Not tested AGI-3 Protein 3e-63 44
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 2e-55 42
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 5e-61 42
ECs4534 NP_312561.1 integrase Not tested LEE Protein 5e-61 42
int AAC31482.1 CP4-like integrase Not tested LEE Protein 4e-61 42
int ACU09430.1 integrase Not tested LEE Protein 4e-61 42
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 4e-61 42
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 4e-61 42
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybl123 YP_003000524.1 ybl123 VFG0626 Protein 7e-133 94
ybl123 YP_003000524.1 ybl123 VFG1693 Protein 4e-132 94
ybl123 YP_003000524.1 ybl123 VFG0783 Protein 2e-61 42
ybl123 YP_003000524.1 ybl123 VFG0598 Protein 2e-61 42