Gene Information

Name : Desal_0979 (Desal_0979)
Accession : YP_002990583.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Virulence
Product : 3-deoxy-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : 2.7.7.38
Position : 1098955 - 1099698 bp
Length : 744 bp
Strand : -
Note : CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS

DNA sequence :
ATGAGTATTGTTTACGGATGCTATGGCATCATCCCGGCCCGCTATGATTCGAGCCGGTTTCCCGGTAAGCCCCTTGCGGA
TATCTGCGGAAAACCCATGTTCTGGCATGTCTGGAACCGTGCTTCAAAGTGCCCGGAGATGGACAAAGTGGTCCTTGCCA
CTGATAGTGAAATCATAATGGAAGCTGCGGAGAAACACGGTGTCCCGGCTGTCATGACCAGATCCGACCACACCAGCGGC
ACCGACCGTGTACTGGAAGCGGCCCGCAAACTGGACCTTCCTTCAGATTCGGTTGTGGTCAACATTCAGGGCGATGAACC
ATGCCTAGAACCGGCTATGATCTCTGAGTTGGTTTCACCTTTTGCTAAAGATGGGGTAAGAGTAACAACACTGGCCTCGC
CCATAAGTGCGGACGAAGCCCAAAGTCCGGACCGTGTAAAAGTAGCACTTGCAAAAGATGGCCGGGCGTTATACTTTTCC
CGCTCACCCATTCCATTTTCCCATCAGGGTGACGGGGATTACCTTCTACATATCGGCCTTTACGGTTTCCGCATGGAAGC
CCTTGAAACCTTTGCCGGCACGGATGTTTCGCCTCTTGAAAAAAGAGAGCGGCTGGAACAGCTCCGACTGCTGGAAAACG
GAATACCCATCCATGTCACCATTACAGAACACTCCTGCCACGGAGTGGACCGTCCAGAAGACTTGGATACAGCCATTAAG
ATTCTTGAGAGGGAGAAAATATGA

Protein sequence :
MSIVYGCYGIIPARYDSSRFPGKPLADICGKPMFWHVWNRASKCPEMDKVVLATDSEIIMEAAEKHGVPAVMTRSDHTSG
TDRVLEAARKLDLPSDSVVVNIQGDEPCLEPAMISELVSPFAKDGVRVTTLASPISADEAQSPDRVKVALAKDGRALYFS
RSPIPFSHQGDGDYLLHIGLYGFRMEALETFAGTDVSPLEKRERLEQLRLLENGIPIHVTITEHSCHGVDRPEDLDTAIK
ILEREKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 1e-31 44
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-31 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 3e-31 42