Gene Information

Name : Desal_0491 (Desal_0491)
Accession : YP_002990097.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Resistance
Product : hexapaptide repeat-containing transferase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0110
EC number : -
Position : 535819 - 536463 bp
Length : 645 bp
Strand : -
Note : KEGG: mmw:Mmwyl1_0155 hexapaptide repeat-containing transferase

DNA sequence : 
ATGTCCTCAAGCATGAAATATCCTGATCCCGGCACCAAACATCCGGTAGCAGGTTTTCCGCAAGTAACGTTCATCAAAAA
CTTCAATGAGAATCACAATGTAATAATCGGTGACCACACATATTATGATGATCCATCGGGACCGGATAATTTCTTTGAAA
ACATCCTATATCATTTTGATTTTATAGGCGACAAACTGATCATTGGCCGTTATTGCGCCATTGCCAGAAATGTTTCTTTC
ATAATGAACGGGGCAAACCATGCCACGGGTGGTTTCTCCACCTACCCATTTTTCATTTTCGGATCGGGATGGAAGGATGC
CACCCCTCCGGCAGAGAATACTTCATACAAAGGCGATACTGTAATCGGCAGTGATGTCTGGATCGGATATGACGCCACGA
TCATGCCGGGAGTTAACATCGGACACGGCAGCATCATCGGAGCAAAATCAGTAGTCACAAAAGACGTTCCTCCATACAGC
ATTGTTGCCGGAAATCCGGCAAGAGTAGTTAGAATGAGATTTGATGAAAATACAATTGCAGCATTGCTGGATGCACAATG
GTGGGAATGGGAACCTGAAAAGGTGACCCGAAATCTGCCTGCCATTATCGGCTCTGATATGGAACAATTGAAAAAAGCAA
CCTAG

Protein sequence : 
MSSSMKYPDPGTKHPVAGFPQVTFIKNFNENHNVIIGDHTYYDDPSGPDNFFENILYHFDFIGDKLIIGRYCAIARNVSF
IMNGANHATGGFSTYPFFIFGSGWKDATPPAENTSYKGDTVIGSDVWIGYDATIMPGVNIGHGSIIGAKSVVTKDVPPYS
IVAGNPARVVRMRFDENTIAALLDAQWWEWEPEKVTRNLPAIIGSDMEQLKKAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 3e-30 44
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 3e-30 44
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 7e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_0491 YP_002990097.1 hexapaptide repeat-containing transferase AM180355.1.gene2499. Protein 3e-41 45
Desal_0491 YP_002990097.1 hexapaptide repeat-containing transferase AF322577.2.gene4.p01 Protein 2e-30 44
Desal_0491 YP_002990097.1 hexapaptide repeat-containing transferase AY740681.1.gene5.p01 Protein 2e-30 44
Desal_0491 YP_002990097.1 hexapaptide repeat-containing transferase AY123251.gene2.p01 Protein 3e-29 42
Desal_0491 YP_002990097.1 hexapaptide repeat-containing transferase NC_002516.2.878374.p Protein 2e-28 42