Gene Information

Name : Desal_0418 (Desal_0418)
Accession : YP_002990024.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 451144 - 451626 bp
Length : 483 bp
Strand : +
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: hypothetical protein; KEGG: bpt:Bpet2446 hypothetical protein

DNA sequence : 
ATGGCTAAAGAAGGTTCCGTAGCTCCAAAAGAGCGGGTCAATATTGTTTACAAGCCTGATACCGGAGATGCCAAGGAAGA
GGTCGAGCTTCCTCTCAAACTGCTGGTGGTCGGCGATTTTACCCAGAAAGACGATGACCGCATGGTCGAGGATCGTGATC
CGGTAAACATCGACAAGGATAATTTCAACGAAGTTCTCAAGGCTCAGGATCTTGAACTGAACATGGGCGTTGAGGACAAG
CTTAGCGGTGATTCTGATGCTCAGATGGCGGTCAAGCTCAAGTTTGAAAGTCTCAAGGACTTTGATCCGGACCGGATCAT
CAGTCAGGTTCCTGAATTGCAAAAGCTCATGGAACTCCGCGAAGCCTTGAAAGCACTGAAGAGTCCGCTCTCCAATGTAC
CGGAATTCAGGAAAAAGGTTCAGGAATTGGTCAAGGATGACGGCGCACGCGAAAAGCTGCTTAAAGAACTTGGAATCGAG
TAA

Protein sequence : 
MAKEGSVAPKERVNIVYKPDTGDAKEEVELPLKLLVVGDFTQKDDDRMVEDRDPVNIDKDNFNEVLKAQDLELNMGVEDK
LSGDSDAQMAVKLKFESLKDFDPDRIISQVPELQKLMELREALKALKSPLSNVPEFRKKVQELVKDDGAREKLLKELGIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 9e-27 49
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-26 45
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 2e-26 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_0418 YP_002990024.1 type VI secretion protein VFG2474 Protein 3e-37 55
Desal_0418 YP_002990024.1 type VI secretion protein VFG2092 Protein 3e-36 55