|
Name : Desal_3668 (Desal_3668) Accession : YP_002993253.1 Strain : Desulfovibrio salexigens DSM 2638 Genome accession: NC_012881 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 4101291 - 4103270 bp Length : 1980 bp Strand : + Note : TIGRFAM: transketolase; PFAM: transketolase; transketolase; KEGG: dat:HRM2_48140 Tkt1 DNA sequence : ATGAGTAACAACCAGTTGGACCAGAAAGCGGTCAACGTTGTAAAAGGTTTGATCATGGACTCCATCCGCAAGGCCAATTC CGGCCATCCCGGTGGCTCCATGTCTTCCGCGGACTTCGCCTACGTCCTGTACAAGGACTTCCTTAAATTCGATCCCAGCA ATCCCGAGTGGGCTGACCGCGACCGTTTCGTAATGGCTGCAGGTCACGAATCCCCGCTGCTCTACTCCATCCTGCATCTC TGCGGATTCCTGACCATCGAAGACCTCAAGCAGTTCCGCCAGCTGGATTCCATCACCCCCGGCCATCCCGAACACGACAT GACTCCCGGCGTTGAAGCCACTTCCGGCCCTCTGGGTCAGGGTTTCTGCGTCGGTGTAGGTATGGCTACCGCTGAGGCTT TCCTCAACGCCAACACCAACGATGACGTTGTAGATCACTACACCTACGTTCTCTCCTCCGACGGTGACTTTCAGGAGCCT GTAGCACTCGGCGCTGCTACCCTCGCCGGTCTCTGGGGACTTGGCAAACTCATCGTTTACTACGATTCCAACGACATCCA GCTCGCAGGCCCCACCAGCAAGTGCGACTGCACCGACTTCAAAAAAGTTTTCGAAGCTATGTGCTGGCACGTTGTAGAAA TCGACGGTCACGACCACGAAGCTATCCGCGCAGCTGTAAAAGCTGGCCAGGCTGAAACTTCCAAGCCGACCATCATCATA GGTAAGACCGTAATGGCGAAAGGTGCCGCTACCTGCGAAGGCAGCCACTCCACCCACGGTTCTCCCCTTTCTCACGAAGA AATTGAAGCAACCAAGAAATGCTTCGGTCTTCCCGAAAAAGAAACTTTCTACGTACCCGAAGATGTTGTTGAACATTTTC AGGCTCGTTTCCCCGATCTCAAAGCACTGGCAGCCCAGTGGAAAGAGAAATCCGATGCAGCCCTCGCTGCTGACGAAAAA ATCGCTGCTTTCTGGGCACAGGCCAACACTCCCCGTGGCGCGATCAAACTCGAACTGCCTGAATTCGAAGCAGGCCAGTC CATTGCTACCCGTAAGGCCTGGGGCGCATGCCTCGATGCTATCACCGATTCTTTGCCCACTCTCGTGGGTGGTTCCGCGG ACCTCGATCCCTCCAACCAGACTGCAAACTTCCGCAAAAAAGTTGGCGACTTCGCTATCGACGGCAAAACCGCACGTAAC CTTGCTTTCGGTGTTCGTGAGTTCCCCATGTCCGTTATCCTCAACGGTATGGCTCTCCACGGCGGCGTAATCCCCTTCGG TGCGACATTCCTGACCTTCTCCGACTACTGCCGTAACGGTATGCGCATGTCTGCTCTGCAGCACCTGCCCGTTATCTACA TCTACACCCACGATTCTTTCTACGTAGGTGAAGACGGCCCGACCCACCAGCCCATCGAGCACGTAGCATCCCTGCGTCTC ATCCCGAACATGCTGGTGCTTCGTCCCGCAGATGCACGCGAAACCGCAGCATGCCTCGAAATCGCCATGGCTCAGGAAAA ACGTCCTTCCTCCCTCATGCTCACCCGTCAGGGACTGCCCGTCCTCGACAAAGATGAGTACCCGCAGGTAGAAGAAGGCG TTAAACGCGGCGGTTACATCGTAAAAGATTGCGACGGCACCCCGGACATGATCGCTATTGCCGCAGGTTCCGAAGTATCC ATGGCTATCGAAGCCGCTTCCATGATCGAAGGCAAAAAGATCCGCGTGGTCTCCATGCCTTCCGTAGAACTCTTCGAAGA GCAGGATCAGGAATACAAGGATTCCGTACTTGATCCCAACGTACGCACCCGCATCGCAGCAGAAGCTGGCCGTCCCGAAG GCTGGTACAAATACGTCGGCATGGACGGCGCAGTACTCGGCATCGACCACTTCGGCGCATCCGCACCCGCAGCTCAGCTC GCAGAGAAATACGGTTTCACCGCCGCCAACCTCGCTGAGATGATGAAGAAACAGTTCTAG Protein sequence : MSNNQLDQKAVNVVKGLIMDSIRKANSGHPGGSMSSADFAYVLYKDFLKFDPSNPEWADRDRFVMAAGHESPLLYSILHL CGFLTIEDLKQFRQLDSITPGHPEHDMTPGVEATSGPLGQGFCVGVGMATAEAFLNANTNDDVVDHYTYVLSSDGDFQEP VALGAATLAGLWGLGKLIVYYDSNDIQLAGPTSKCDCTDFKKVFEAMCWHVVEIDGHDHEAIRAAVKAGQAETSKPTIII GKTVMAKGAATCEGSHSTHGSPLSHEEIEATKKCFGLPEKETFYVPEDVVEHFQARFPDLKALAAQWKEKSDAALAADEK IAAFWAQANTPRGAIKLELPEFEAGQSIATRKAWGACLDAITDSLPTLVGGSADLDPSNQTANFRKKVGDFAIDGKTARN LAFGVREFPMSVILNGMALHGGVIPFGATFLTFSDYCRNGMRMSALQHLPVIYIYTHDSFYVGEDGPTHQPIEHVASLRL IPNMLVLRPADARETAACLEIAMAQEKRPSSLMLTRQGLPVLDKDEYPQVEEGVKRGGYIVKDCDGTPDMIAIAAGSEVS MAIEAASMIEGKKIRVVSMPSVELFEEQDQEYKDSVLDPNVRTRIAAEAGRPEGWYKYVGMDGAVLGIDHFGASAPAAQL AEKYGFTAANLAEMMKKQF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 6e-107 | 43 |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 9e-113 | 43 |
