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Name : Desal_3647 (Desal_3647) Accession : YP_002993232.1 Strain : Desulfovibrio salexigens DSM 2638 Genome accession: NC_012881 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 4077638 - 4079077 bp Length : 1440 bp Strand : - Note : PFAM: type II secretion system protein E; SMART: ATPase AAA; KEGG: rso:RSc3115 general secretion pathway protein E DNA sequence : GTGGACCTTTTTTTGACCTTTCCTCAGCGTAATGAGTTTATACCCGTTGAAGTCAGGGATAAACAAATCAAAGTGCTCCT TCAGAACGAGGCTTCTTTGCCTATGGCAGACTTTTTGTCATGGAAGCTGGGAAAAAATGTTGTTTCTGAAATTGTATCCG AGGAAGAGTTCTTTCCGCTACTTGAACAGGCTCTTACTGTCTGGGAAGAAGAGAGTGCTATTGAGTCTGATTCCGATGAC TCCGAAGGCGAAGATGGGCAGGATTTGTTAGGCTGGTCTCATGACGATGCTCCCATCGTCCGACTAGTTAACAAGACTTT GCATCAGGCCATTTCCACTGGTGCCAGTGATATCCATTTCGAGGGTCAGGGCAATGGTTTTGTTGTCCGTTATCGTCAAG ATGGAGTGCTTAAAGCTGTAAAACGCTTAGATAAGGGGCTTCAACCTACTGTTATTGCCCGTATTAAGGTTATGGGTGAG ATGGATGTGGCCGAGAGCCGCAAGCCGCAGGATGGACGTATTTTTCTCAAACTCGGACAGAAGGAAGTTGATGTCCGTGT TTCCACAATTCCTACCATGAGTGGGGAAAAGGCTGTCCTTCGTGTACTGGATCGCTCTAAAAATATTCTTAACCTTGAAG ACCTTGGCCTCAAAGGCCCAGATCTTGAGTTGTTCAGAAAAGTTCTTGCCCAGCCCCACGGTATCGTGCTTGTTACCGGG CCGACTGGTTCTGGTAAAACTACCAGTTTATATGCCGGTCTAAGTGAGCTTCCACGTGATGACAAGAATATTGTTACCGT AGAAGATCCCGTTGAATACCAACTTTCCGGGGTCAATCAGGTTCAGGTCAATAAGGCTGCAGGCATGACCTTTGCGACTA CCATTCGTTCCTTCCTTAGACAGGACCCGGACATTATCCTTGTAGGTGAGATTCGAGATCAGGAAACTGCAAGCACTGCG GTTCAGGCTTCACTTACCGGTCACCTTGTTTTGTCCACCTTGCATACTAACGATGCAGCCACTGCAGTCACCAGAATGCT CGATATGGGAATTGAGCCCTTTCTGTTGGCATCTTCTCTTTCTCTTGTGCTTGGTCAGCGTTTGGTTCGCGTTAATTGTA AACATTGTTCCAGAAAAGTAGAAGTGTCCGAGAATACCTATAAGCTTTTTGAGGAGACAGCTGGTCTTCCTTCCACTCAG ACAGCCGGTGCCGGATGCGAGCATTGTAACTTCACTGGCTTCAGCGGGCGTCGCGGTGTTTACGAGCTTATCCCGGTTAC AGAGGATATGCGCGGGCTGATTATGGAAGTTGCTTCTTCAGACCAGATCAAGGCTTACGCTAAAGAAATGGGCCGTGAAA CTATGGTCGATCATGGTATTCGTCTTGTTCGTGAAGGTGTTACCACTCTTGAAGAAGTTGTTCGAGTTACTAAGCTTTAA Protein sequence : MDLFLTFPQRNEFIPVEVRDKQIKVLLQNEASLPMADFLSWKLGKNVVSEIVSEEEFFPLLEQALTVWEEESAIESDSDD SEGEDGQDLLGWSHDDAPIVRLVNKTLHQAISTGASDIHFEGQGNGFVVRYRQDGVLKAVKRLDKGLQPTVIARIKVMGE MDVAESRKPQDGRIFLKLGQKEVDVRVSTIPTMSGEKAVLRVLDRSKNILNLEDLGLKGPDLELFRKVLAQPHGIVLVTG PTGSGKTTSLYAGLSELPRDDKNIVTVEDPVEYQLSGVNQVQVNKAAGMTFATTIRSFLRQDPDIILVGEIRDQETASTA VQASLTGHLVLSTLHTNDAATAVTRMLDMGIEPFLLASSLSLVLGQRLVRVNCKHCSRKVEVSENTYKLFEETAGLPSTQ TAGAGCEHCNFTGFSGRRGVYELIPVTEDMRGLIMEVASSDQIKAYAKEMGRETMVDHGIRLVREGVTTLEEVVRVTKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-88 | 51 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-88 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Desal_3647 | YP_002993232.1 | type II secretion system protein E | VFG0182 | Protein | 1e-92 | 52 |
| Desal_3647 | YP_002993232.1 | type II secretion system protein E | VFG1876 | Protein | 2e-87 | 50 |
| Desal_3647 | YP_002993232.1 | type II secretion system protein E | VFG2048 | Protein | 9e-89 | 50 |
| Desal_3647 | YP_002993232.1 | type II secretion system protein E | VFG0233 | Protein | 3e-75 | 46 |
| Desal_3647 | YP_002993232.1 | type II secretion system protein E | VFG2426 | Protein | 1e-70 | 45 |
