Gene Information

Name : Desal_3596 (Desal_3596)
Accession : YP_002993181.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 4018819 - 4019280 bp
Length : 462 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: gbm:Gbem_0592 general secretion pathway protein G

DNA sequence : 
ATGCAGAAAAAAAGAATTCGTATTGCTGACCTTAAAAAGGGGCAGCGTGGTTTCAGTCTTATTGAGTTGATGATTGTTAT
TGTTATTCTTGGCCTGTTGGCTTCAATGCTTGTTCCTAAAATCATGGACCGTCCTAACGAAGCAAGGGTGACTAAAGCCA
AGATGGATATGAAGGCTTTGGATTCGGCTTTGAAGTTATATAAATTGGATACCGGACGTTACCCCACCACCGAGCAGGGA
CTTCAGGCTTTGATCACCAAGCCGGATACCCGTCCTGTCCCCCGGAACTACCGCAAAGGTGGATATCTGGATTCCGCTAC
TGCTCCTGTTGATCCCTGGGGTTATGATTATATTTACAGAAGTCCCGGAGAAGAAGGACGTCCTTACGAATTGATCTCCC
TTGGTGCCGACGGCATGGAGGGCGGCGAAGACTATGACGCTGATATCAAGAGCTGGGAATAA

Protein sequence : 
MQKKRIRIADLKKGQRGFSLIELMIVIVILGLLASMLVPKIMDRPNEARVTKAKMDMKALDSALKLYKLDTGRYPTTEQG
LQALITKPDTRPVPRNYRKGGYLDSATAPVDPWGYDYIYRSPGEEGRPYELISLGADGMEGGEDYDADIKSWE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-29 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 8e-30 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_3596 YP_002993181.1 general secretion pathway protein G VFG0180 Protein 2e-35 55
Desal_3596 YP_002993181.1 general secretion pathway protein G VFG1871 Protein 7e-31 54
Desal_3596 YP_002993181.1 general secretion pathway protein G VFG2050 Protein 2e-30 53