Gene Information

Name : Desal_3535 (Desal_3535)
Accession : YP_002993120.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3954607 - 3955275 bp
Length : 669 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: glo:Glov_0747 ABC transporter

DNA sequence : 
ATGCTTAACATCGAGGACGTTCATAAATCCTACCTGCTGGGCACGGTTGAAGTTGAGGTACTCAAAGGGGTAAACCTCAA
TGTTGACGATGGCGAGTTGCTAGCCATCCTCGGCTCATCCGGCTGCGGCAAATCAACTCTTATGAACATATTGGGATTCC
TTGATCAGCCCAGTTCCGGCACTTACCGCTTCAACGGTAAGCTGGCCGATAAAATGAGTGATGATGAACTTTCCGACATT
CGTAACCATGAAATAGGCTTTGTGTTCCAGCAATTTCACCTGCTGCCCAAGCTTACCGCCCTTGATAATGTCTGCCTGCC
GCTGCTTTACCGCGGGGTCCCCAAAAAGGAACGTGAAGCACTGGCCGAAGAAATGCTGACGAAAGTCGGCATGGGCGAAC
GCGGAGACCACCGCCCCAATGAACTTTCCGGCGGCCAGCAACAACGGGTCGCCATTGCCCGAGCCCTGTGCGGGGAACCT
TCACTTATTCTAGCTGACGAACCAACCGGAGCTCTTGATACAGCAACAGGCAAAGACATCATGGACCTTTTCTTAAGCCT
GAATGAAGAAGAAGGCATAACCGTTGTCATCATCACTCATGATCCCGGTCTTGCAAAGCGTTGTAAACGTTCCATACGCA
TGCGGGATGGCAGACTGGAGGGCGTATGA

Protein sequence : 
MLNIEDVHKSYLLGTVEVEVLKGVNLNVDDGELLAILGSSGCGKSTLMNILGFLDQPSSGTYRFNGKLADKMSDDELSDI
RNHEIGFVFQQFHLLPKLTALDNVCLPLLYRGVPKKEREALAEEMLTKVGMGERGDHRPNELSGGQQQRVAIARALCGEP
SLILADEPTGALDTATGKDIMDLFLSLNEEEGITVVIITHDPGLAKRCKRSIRMRDGRLEGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_3535 YP_002993120.1 ABC transporter NC_012469.1.7686878. Protein 4e-55 55
Desal_3535 YP_002993120.1 ABC transporter NC_008702.1.4606598. Protein 4e-47 46
Desal_3535 YP_002993120.1 ABC transporter CP001581.1.gene798.p Protein 7e-37 43
Desal_3535 YP_002993120.1 ABC transporter NC_012469.1.7686946. Protein 3e-28 41