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Name : Desal_3376 (Desal_3376) Accession : YP_002992965.1 Strain : Desulfovibrio salexigens DSM 2638 Genome accession: NC_012881 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 3776128 - 3777405 bp Length : 1278 bp Strand : - Note : KEGG: dvm:DvMF_2224 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTCGATTTGAAATTTGTACAGAACAATCTGGATGTAGTTCGCGAAAGCCTCGAAAAAAGAGGTTCTAAACTTGATGT TAATGAATTCAGCGATTTGGATTCCCGCCGTAAGTCCCTGCTGCAGGAAGTGGAATCCCTCAAGGCCGAGCGTAACTCCA CCTCTGGCGAGATTGCAAAGATAAAGAGAGAAGGGGGCGATGCTTCCGAGATCATCGCTCGCATGGGTGAAGTCTCAGGC AAAATCAAGGCCCTTGATGAAGACCTTAAAGATATTGAAGCCGCAGAGCGCGAATGGCTCAGCTCCGTTCCCAACATGCC TGACGAGTCCGTGCCTTTCGGTAAAACCGAGGACGATAACCCGGTGATCCGTCATTGGGGCGAGAAGCCTGAGTTTGATT TCACTCCCCGTGAGCACTGGGATCTGGCCGTTGAACTTGGCGGTGTTGATTTTGAACGTGCAGCCAAACTTACCGGAGCG CGTTTTGTAGTGCTTAAGAAATGGGGTGCACGTCTGGAACGCGCACTGACTTCTTTCATGGTCGATGTTCAGACTATGGA CCACGGTTACACCGAAGTTATTCCCCCGTACATCGTTAACCGCGATTCCCTGTTTGGTACCGGTCAGCTGCCTAAGTTTG AAGAGGACCTTTTCAAGCTGAAGAACTGGGAATACTACATGATCCCCACTGCGGAAGTTCCGTTGACCAACCTGCACCGT GATGAAGTGCTTAGTGAAGATGATCTTTCCATTGCCTACTGCGCACCGACTCCCTGCTTCCGTTCCGAAGCCGGTTCTTA CGGTAAGGACACCAAAGGCCTTATCCGTCAGCATCAGTTCCACAAAGTAGAGATGGTTCGCTTTGCACACCCGGACAAAA GTTTCGAAGATCTCGAAAAGATGACCGGACATGCTGAGGAAATCCTCAAGCGTCTCGGCCTGCACTACCGGGTTATTACC CTGTGTACCGGTGACATGGGTTTTGGTTCCGCTAAAACTTACGACATTGAAGTATGGCTGCCCGGACAGGATAAATACCG TGAGATTTCTTCCTGCTCCAACTGCGTGGACTTTCAGGCTCGCCGTGCCAACATTAAGTTTCAGCCCAAAGACAGCAAAA AGAAACAGTTCGTACACACATTGAACGGTTCTGGTCTTGCTGTAGGTCGTACTTTTGTTGCTGTAGTTGAAAACTACCAG CAGAAAGACGGCTCCATTGTGATTCCCGAAGCACTGCGTCCTTACATGGGCGGATTGGAAGTAATTACCGCTGAGTAA Protein sequence : MLDLKFVQNNLDVVRESLEKRGSKLDVNEFSDLDSRRKSLLQEVESLKAERNSTSGEIAKIKREGGDASEIIARMGEVSG KIKALDEDLKDIEAAEREWLSSVPNMPDESVPFGKTEDDNPVIRHWGEKPEFDFTPREHWDLAVELGGVDFERAAKLTGA RFVVLKKWGARLERALTSFMVDVQTMDHGYTEVIPPYIVNRDSLFGTGQLPKFEEDLFKLKNWEYYMIPTAEVPLTNLHR DEVLSEDDLSIAYCAPTPCFRSEAGSYGKDTKGLIRQHQFHKVEMVRFAHPDKSFEDLEKMTGHAEEILKRLGLHYRVIT LCTGDMGFGSAKTYDIEVWLPGQDKYREISSCSNCVDFQARRANIKFQPKDSKKKQFVHTLNGSGLAVGRTFVAVVENYQ QKDGSIVIPEALRPYMGGLEVITAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-119 | 58 |
