Gene Information

Name : Desal_0310 (Desal_0310)
Accession : YP_002989916.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Virulence
Product : redoxin
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 330729 - 331244 bp
Length : 516 bp
Strand : +
Note : PFAM: redoxin; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dvl:Dvul_1832 redoxin domain-containing protein

DNA sequence :
ATGAATGAAAGAACAGGAATAATCACTTTTCAGGGCAATCCCCTGACTCTTCTTGGAACTGAAATTAAAGTGGGCGACAA
AGCTCCCGGATTCAACGTTACTGACAATGGACTTGCTCCCAAAGCTCTGTCTGATTTTGCAGGAAAAGTTTTGATCATCA
GTGCAGTACCTTCTCTTGATACTCCGGTCTGCGATATGGAGACCCGTAGGTTCAACAACGAGGCTGCATCTCTTGGCGAA
GACATCAAGATCCTGACTCTGTCCATGGACCTGCCATTTGCTCAGGCCCGTTGGTGCGGTGCTGCCGGAGTCGAAGCAGT
GCAGACCCTCTCCGATTATAAAGAGTCTTCTTTTGGAGAAGCTTACGGCGTGTTGATCAAAGAACTGCGCCTTCTCAGCC
GTGCAGTTTTCGTAGTCGATAAGTCCGGTGAAGTTCAGTACGTACAGTATGTAAATGAAATTACCGAGGAACCGGACTAT
GATGCCGCCCTCGCTGCCGCTAAGAAACTGGTTTAG

Protein sequence :
MNERTGIITFQGNPLTLLGTEIKVGDKAPGFNVTDNGLAPKALSDFAGKVLIISAVPSLDTPVCDMETRRFNNEAASLGE
DIKILTLSMDLPFAQARWCGAAGVEAVQTLSDYKESSFGEAYGVLIKELRLLSRAVFVVDKSGEVQYVQYVNEITEEPDY
DAALAAAKKLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 9e-22 41
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 1e-21 41
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 1e-21 41
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 9e-22 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_0310 YP_002989916.1 redoxin VFG0087 Protein 4e-22 41