Gene Information

Name : rplS (Desal_0199)
Accession : YP_002989808.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Unknown
Product : 50S ribosomal protein L19
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0335
EC number : -
Position : 214471 - 214821 bp
Length : 351 bp
Strand : +
Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site

DNA sequence :
ATGAGCAACGTAATTGCAAAAATCGAACGCGAACAGATGCGTATTGATATGCCCGCTTTCAAAGCTGGCGACACTGTAAA
GGTACACCTGCGTATTATCGAAGGTGAAAAGGAACGTATCCAGGTTTTCCAGGGTGCTGTTCTGCGTTACCGTAAAGGTA
CCACCAACTCCACCTTCACCGTCCGCAAAATTTCTGACGGTATCGGCGTTGAGCGTGTTTTCCCCGTACACTCCCCCTAC
ATCGAGCGTGTAGAGGTAGTTGCTGAAGGTAAAGTACGCCGCAGCCGTATCTACTACCTGCGTGGCCTTAAAGGTAAGGC
TGCACGTATCAAGTCCAAACAGGCTTGGTAG

Protein sequence :
MSNVIAKIEREQMRIDMPAFKAGDTVKVHLRIIEGEKERIQVFQGAVLRYRKGTTNSTFTVRKISDGIGVERVFPVHSPY
IERVEVVAEGKVRRSRIYYLRGLKGKAARIKSKQAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rplS CAA68924.1 ribosomal protein L19 Not tested Internalin Protein 1e-29 54
rplS AAS66827.1 50S ribosomal subunit protein Not tested SSR-1 Protein 5e-25 52