Name : rplS (Desal_0199) Accession : YP_002989808.1 Strain : Desulfovibrio salexigens DSM 2638 Genome accession: NC_012881 Putative virulence/resistance : Unknown Product : 50S ribosomal protein L19 Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0335 EC number : - Position : 214471 - 214821 bp Length : 351 bp Strand : + Note : this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site DNA sequence : ATGAGCAACGTAATTGCAAAAATCGAACGCGAACAGATGCGTATTGATATGCCCGCTTTCAAAGCTGGCGACACTGTAAA GGTACACCTGCGTATTATCGAAGGTGAAAAGGAACGTATCCAGGTTTTCCAGGGTGCTGTTCTGCGTTACCGTAAAGGTA CCACCAACTCCACCTTCACCGTCCGCAAAATTTCTGACGGTATCGGCGTTGAGCGTGTTTTCCCCGTACACTCCCCCTAC ATCGAGCGTGTAGAGGTAGTTGCTGAAGGTAAAGTACGCCGCAGCCGTATCTACTACCTGCGTGGCCTTAAAGGTAAGGC TGCACGTATCAAGTCCAAACAGGCTTGGTAG Protein sequence : MSNVIAKIEREQMRIDMPAFKAGDTVKVHLRIIEGEKERIQVFQGAVLRYRKGTTNSTFTVRKISDGIGVERVFPVHSPY IERVEVVAEGKVRRSRIYYLRGLKGKAARIKSKQAW |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
rplS | CAA68924.1 | ribosomal protein L19 | Not tested | Internalin | Protein | 1e-29 | 54 |
rplS | AAS66827.1 | 50S ribosomal subunit protein | Not tested | SSR-1 | Protein | 5e-25 | 52 |