Gene Information

Name : Desal_1953 (Desal_1953)
Accession : YP_002991552.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 2133775 - 2134689 bp
Length : 915 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dde:Dde_1971 tyrosine recombinase XerD subunit

DNA sequence : 
ATGACCGAGAATGAAAACAATACATCCTGTAAACACCAATGGATCGACCGTTATCTGGAGTACCTTCTAATTGAGCGTGG
TCTCTCGGAAAACAGCCTTAGTGGATATCTGAGTGATCTGGAGTCTTTTCAGTCTTTTCTGGAAGATAGGTCCGCGAAAA
TAGAAGACGCCACAAGTCAGACATTGCTGCTCTACCTTACATATCTAAGGTCAAAAGCATTGAAATCAACCTCGCTGGCG
AGGCATCTTTCGTCTTTGCGGGGATTTTTCGCGTTTTGCACGTCACGGGGATTCATTAAAGAAGACCCTGCAACTCTGCT
GGAAAACCCGAAGCTCCCCAGAAAAATTCCTGAGTTCCTATCACCGGAGGAAATCGGCCGCATGCTCGCCCTGCCCAAGC
TGACCGAGAAACTTGGGTTTCGCGATCGGACTATGCTTGAGCTGCTTTATGCAGCCGGAATGAGAGTCTCCGAATTGATC
AATCTTAACATTGAAGACTTTGATCCTCAAACCGGAGTTCTCATTATTTTCGGCAAAGGTTCCAAGGAACGGCTGGTGCC
GATTCATTATGTGGCGCAAAATTTCTTAAACCAATACATTAAGGATTGGCGTCCTGCTTTTAATCCCAAGGTTAAGAACA
TCTTCTTAAACAGATCAGGAAAAGGACTTACCAGACAGGGTGTCTGGAAACTGATCAAGAAGTTCGCACTGGAAGCAGGT
ATAAAACGTTCAATATCTCCGCACACTTTTAGGCATTCGTTTGCCACCCACTTGCTGGATGGCGGTGCGGATCTGCGTAC
AGTCCAGTTGCTTCTTGGTCATTCAGACATTAATGCTACCGAAATATACACACATATTCAAGCCGGAAGATTGGTCCAGC
TTCATAAACGCTTTCACCCACGTTCTGTAATGTGA

Protein sequence : 
MTENENNTSCKHQWIDRYLEYLLIERGLSENSLSGYLSDLESFQSFLEDRSAKIEDATSQTLLLYLTYLRSKALKSTSLA
RHLSSLRGFFAFCTSRGFIKEDPATLLENPKLPRKIPEFLSPEEIGRMLALPKLTEKLGFRDRTMLELLYAAGMRVSELI
NLNIEDFDPQTGVLIIFGKGSKERLVPIHYVAQNFLNQYIKDWRPAFNPKVKNIFLNRSGKGLTRQGVWKLIKKFALEAG
IKRSISPHTFRHSFATHLLDGGADLRTVQLLLGHSDINATEIYTHIQAGRLVQLHKRFHPRSVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-46 41
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-46 41