Gene Information

Name : Desal_1150 (Desal_1150)
Accession : YP_002990752.1
Strain : Desulfovibrio salexigens DSM 2638
Genome accession: NC_012881
Putative virulence/resistance : Virulence
Product : FliI/YscN family ATPase
Function : -
COG functional category : N : Cell motility
COG ID : COG1157
EC number : 3.6.3.14
Position : 1282445 - 1283758 bp
Length : 1314 bp
Strand : -
Note : KEGG: dde:Dde_0350 ATPase FliI/YscN; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; SMART: ATPase AAA

DNA sequence :
ATGGCCGACATGAAAGGCTGCACTCAACTCCTCTCCGCACTGGACCCCTGCCGCAGCTACGGCCGGGTCAGCAAGGTTGT
AGGCTTAATTGCCGAAGGTAAAGGCATCAAGGCCCCCTTAGGATCAGTCTGCCAACTCATTCCCGAAGAAGCAGAATCCC
CCATCGCTGCCGAGGTAGTCGGTTTCCGGGATGGAGCCTGCTTGTTCATGCCTTACGGAGAAATGCATGGCATCAGCCCC
GGAAGTCTGATTGAGAACTCCAAAACACCTCCCAAAGTCCCTGTAGGCATGAACCTGCTGGGACGAGCTGTAGACGCATT
TGGCGAACCAATTGACGGCAAAGGGCCGATCATTCCCGATGCTTACAATCCCCTGCATCGCGACCCACCCAACCCGCTGG
AACGCCCGCGTATCAATGAACCGCTCGATGTTGGTGTTAAAGCCATCAACGGCTTGCTGACACTGGGCAAGGGTCAGCGC
ATGGGTATTATGGCCGGCTCCGGTGTCGGTAAATCGACACTACTCTCCATGATGGCCCGTTACACAGTAGCTGACATCAA
CGTCATCGCCCTGATCGGTGAGCGTGGTCGTGAGGTTGTGGAATTTATAGAACGCGATTTAGGACCGGAAGGACTCGCCC
GTTCTGTGCTGGTTATCGCCACCTCGGACAAAAGTCCGCTTATCCGTCTGCGTGCGGCCTATACCGCCACCGCCATTGCC
GAATATTTCCGGGATTTGAATAAAGATGTGCTCTTAATGATGGATTCAGTTACCCGCTTTGCCATGGCCGGTCGTGAGGT
AGGTCTTGCAGCAGGTGAACCGCCGACACGTGGGGGGTACACTCCTTCAGTTTTCGCACAGCTGCCTAAACTTCTGGAGC
GCGCAGGTAAAAACCCAAACGGTTCCATAACCGGGGTCTACACAGTACTTGTTGATGGTGATGACTTCACCGAACCCATT
GCCGATGCTGTACGTTCTATTCTTGACGGTCACATCGTGCTCACTCGCGACCTTGCCGACCAAGGGCACTACCCTTGCAT
CGATGTTCTTAAAAGTGTCAGTCGTGTTCGCGGAGACATTGTTCAAAACGACATTGTTGCTGCCGGACGTAAGGTCCTCG
GCCAGTTGGCTACTTTCCGTAAAGTGGAAGACATGGTCAATATCGGTGCCTACCAGAAAGGTGCAAACCCGGAAATTGAC
ACTGCTATAAAAATGGTCCCGGCGATCAATGGATTCCTGCAACAGCTTGTTGAAGACAAACAGACGATTGACGAAAGCTT
TGCTAAACTGATGGAACTTGCAGCAGCTAGTTAA

Protein sequence :
MADMKGCTQLLSALDPCRSYGRVSKVVGLIAEGKGIKAPLGSVCQLIPEEAESPIAAEVVGFRDGACLFMPYGEMHGISP
GSLIENSKTPPKVPVGMNLLGRAVDAFGEPIDGKGPIIPDAYNPLHRDPPNPLERPRINEPLDVGVKAINGLLTLGKGQR
MGIMAGSGVGKSTLLSMMARYTVADINVIALIGERGREVVEFIERDLGPEGLARSVLVIATSDKSPLIRLRAAYTATAIA
EYFRDLNKDVLLMMDSVTRFAMAGREVGLAAGEPPTRGGYTPSVFAQLPKLLERAGKNPNGSITGVYTVLVDGDDFTEPI
ADAVRSILDGHIVLTRDLADQGHYPCIDVLKSVSRVRGDIVQNDIVAAGRKVLGQLATFRKVEDMVNIGAYQKGANPEID
TAIKMVPAINGFLQQLVEDKQTIDESFAKLMELAAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0267 YP_002345348.1 type III secretion system ATPase Virulence Not named Protein 2e-80 51
lscN AAO18044.1 LscN Virulence TTSS locus Protein 4e-94 50
hrpB6 AAF61281.1 HrpB6 Virulence Hrp PAI Protein 8e-96 50
hrcN NP_640767.1 type III secretion system ATPase Virulence Hrp PAI Protein 7e-95 50
hrcN YP_362163.1 type III secretion system ATPase Virulence Hrp PAI Protein 6e-95 50
hrcN YP_198730.1 type III secretion system ATPase Virulence Hrp PAI Protein 1e-95 50
hrpB6 AAB08461.1 HrpB6 Virulence Hrp PAI Protein 4e-95 50
hrcN AAP34339.1 HrcN Virulence Hrp PAI Protein 1e-95 50
hrpB6 BAB07852.1 HrpB6 Virulence Hrp PAI Protein 8e-96 50
XC_3006 YP_244074.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-93 50
hrcN NP_636610.1 type III secretion system ATPase Virulence Hrp PAI Protein 4e-93 50
escN AFO66300.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-78 50
escN AFO66415.1 putative LEE-encoded type III secretion system ATPase Virulence SESS LEE Protein 5e-78 50
ssaN NP_805086.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-74 48
ssaN NP_460380.1 type III secretion system ATPase Virulence SPI-2 Protein 1e-74 48
ssaN YP_216423.1 type III secretion system ATPase Virulence SPI-2 Protein 2e-75 48
ssaN CAA70537.1 secretion system apparatus Virulence SPI-2 Protein 9e-75 48
ssaN NP_456113.1 putative type III secretion ATP synthase Virulence SPI-2 Protein 2e-74 48
escN YP_003232153.1 T3SS structure protein EscN Virulence LEE Protein 2e-84 46
escN AAK26715.1 EscN Virulence LEE Protein 6e-84 46
escN AAL57542.1 EscN Virulence LEE Protein 6e-84 46
escN CAI43874.1 EscN protein Virulence LEE Protein 3e-84 46
escN CAC81862.1 EscN protein Virulence LEE II Protein 2e-84 46
escN NP_290268.1 hypothetical protein Virulence LEE Protein 1e-83 46
ECs4568 NP_312595.1 EscN Virulence LEE Protein 1e-83 46
escN AAC38383.1 EscN Virulence LEE Protein 3e-83 46
escN YP_003236088.1 translocator EscN Virulence LEE Protein 9e-84 46
escN AAC31513.1 L0034 Virulence LEE Protein 1e-83 46
escN YP_003223475.1 translocator EscN Virulence LEE Protein 4e-84 46
unnamed ACU09458.1 type III secretion apparatus H+-transporting two-sector ATPase Virulence LEE Protein 1e-83 46
unnamed AAL06369.1 EscN Virulence LEE Protein 7e-82 46
hrcN AAR25633.1 type III secretion cytoplasmic ATPase HrcN Not tested Not named Protein 2e-66 45
hrcN AAG33879.1 HrcN Virulence Hrp PAI Protein 2e-66 45
hrcN NP_791227.1 type III secretion cytoplasmic ATPase HrcN Virulence Hrp PAI Protein 5e-68 44
hrcN AAT96339.1 HrcN Virulence S-PAI Protein 1e-76 44
hrcN AAT96258.1 HrcN Virulence S-PAI Protein 7e-76 44
hrcN AAT96299.1 HrcN Virulence S-PAI Protein 3e-76 44
hrcN AAB06001.1 HrcN Virulence Hrp PAI Protein 3e-71 43
hrcN AAT96141.1 HrcN Virulence T-PAI Protein 8e-69 43
hrcN AAT96195.1 HrcN Virulence T-PAI Protein 7e-69 43
hrcN ABA47275.1 HrcN Virulence S-PAI Protein 1e-82 43
ECs3730 NP_311757.1 ATP synthase SpaL Not tested LIM Protein 5e-63 42
hrcN ABQ88354.1 HrcN Virulence Hrp PAI Protein 1e-65 42
hrpJ4 AAA81942.1 HrpJ4 Virulence Hrp PAI Protein 1e-65 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG2144 Protein 1e-91 52
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG0192 Protein 5e-97 51
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG0390 Protein 2e-91 51
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG0048 Protein 2e-94 50
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG2499 Protein 1e-89 50
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG2331 Protein 2e-86 49
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG1254 Protein 1e-92 49
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG0515 Protein 5e-75 48
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG0730 Protein 2e-83 46
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG0812 Protein 6e-84 46
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG1778 Protein 8e-65 46
Desal_1150 YP_002990752.1 FliI/YscN family ATPase VFG1008 Protein 7e-66 43