Gene Information

Name : Dd703_0723 (Dd703_0723)
Accession : YP_002986356.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Virulence
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 816882 - 817424 bp
Length : 543 bp
Strand : -
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: cko:CKO_03842 single-stranded DNA-binding protein

DNA sequence : 
ATGGCCAGCAGAGGCGTAAACAAAGTCATACTTCTCGGGCACCTGGGGCAGGATCCCGAAGTCCGCTATATGCCGAACGG
TGGTGCGGTTGCCAACATTACGCTGGCCACGTCTGAATCCTGGCGTGACAAGCAGACCGGCGAGCAGAAAGAAAAGACCG
AATGGCACCGCGTCGTGCTGTTTGGCAAGTTAGCCGAAGTGGCGGGCGAATACCTGCGCAAAGGCTCTCAGGTTTATATC
GAAGGCCAGTTGCAGACCCGTAAATGGCAGGATCAGTCCGGCCAGGATCGCTACACGACGGAAATCGTGGTCAACGTAGG
CGGCACCATGCAGATGATCGGCGGTCGCGCCGGCGGTGCCGCGCCGGCTGGCGGCGGTATGGGTAACAATAATACTGGCG
GCAACCCGCAGCAGGGCGGCTGGGGCCAGCCGCAACAGCCCGCAGCCTCTTTCAGCGGCGGTGCACAGGCGCCCCGTCCG
CAAAGCGCCCCAATGCCGGGCAACGAGCCGCCGATGGACTTCGACGACGACATTCCGTTCTAA

Protein sequence : 
MASRGVNKVILLGHLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLQTRKWQDQSGQDRYTTEIVVNVGGTMQMIGGRAGGAAPAGGGMGNNNTGGNPQQGGWGQPQQPAASFSGGAQAPRP
QSAPMPGNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 4e-39 66
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 6e-43 60
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 6e-43 60
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-43 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_0723 YP_002986356.1 single-strand binding protein VFG0576 Protein 3e-49 72