Gene Information

Name : Dd703_0392 (Dd703_0392)
Accession : YP_002986028.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 440513 - 441181 bp
Length : 669 bp
Strand : -
Note : response regulator in two-component regulatory system with BasS

DNA sequence : 
ATGAAACTTTTGATTGTTGAAGACGATGCATTGTTACAGGAAGGATTACTGCAGGCGATGCGCAACGAGGGTTACACCTG
TGATTGCGCCACCACCGCCAAAGAGGCCGATGCGCTGATCAACAGTGCCCACTACAGCCTTATTGTGCTTGACCTGGGGC
TGCCGGATGGCGACGGACTGACATTGCTGACGCGCTGGCGCAACAATCAACATTCTCAGCCGGTGCTGATCCTCACCGCG
CGCGATACGGTGGACGAACGAGTCACCGGCCTCAACATCGGCGCGGACGATTACATGATCAAACCCTTTGCGCTCTCGGA
ACTGCTGGCGCGGATTCGCGCCCTGATCCGTCGCCATCAGGGTTCCAGCGAAAACCTGATTCAGGTCGACAACATCACGC
TCGACCTGAACAGCCAACAGGTCATGCTCGACAGCAAACCGGTTATTCTCACCCCGAAAGAGTTCGCCATTCTGTCCCGT
CTGATTCTGAAAGCCGGCTCGCAGGTGCATCGCGAGGTACTGCATCAGGACATCTACAACTGGGATGACGATCCGTCGTC
CAACTCGCTGGAAGTTCATATTCATAACCTACGCCAGAAAATCGGTAAAAACCGCATCAAAACGCTGCGCGGCTTCGGGT
ATCTGTTGACCAAGGATGACCAGCAATGA

Protein sequence : 
MKLLIVEDDALLQEGLLQAMRNEGYTCDCATTAKEADALINSAHYSLIVLDLGLPDGDGLTLLTRWRNNQHSQPVLILTA
RDTVDERVTGLNIGADDYMIKPFALSELLARIRALIRRHQGSSENLIQVDNITLDLNSQQVMLDSKPVILTPKEFAILSR
LILKAGSQVHREVLHQDIYNWDDDPSSNSLEVHIHNLRQKIGKNRIKTLRGFGYLLTKDDQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_0392 YP_002986028.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 6e-68 80
Dd703_0392 YP_002986028.1 DNA-binding transcriptional regulator BasR NC_002516.2.879194.p Protein 6e-21 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_0392 YP_002986028.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 2e-53 61