Gene Information

Name : Dd703_3834 (Dd703_3834)
Accession : YP_002989409.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Unknown
Product : phage portal protein, PBSX family
Function : -
COG functional category : R : General function prediction only
COG ID : COG5518
EC number : -
Position : 4445398 - 4446450 bp
Length : 1053 bp
Strand : +
Note : TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; KEGG: eca:ECA2624 phage capsid portal protein Q

DNA sequence :
ATGAAAAGAAAATATAAACCCGGCGCCCGTCCGGCAATGACGCCTGGTCAGCCGGATATGGCCGCCACTCTGAAAAGCGA
TCCGGGGCTGAGCGCGTTTACCTTTGACGGCCCTTATCCGGTCAGGGACGGCCACGACCTGCTGGATAACATGTATTGCG
CCGATAATGGCCGTTATTACGACACCCCGGTGGACTGGTACGGGCTGGCTCGCGCGTTTGGTAGTGCGTCATGGCACCAG
TCCGCGCTGTACTTCAAACGGAATGCGCTGACCGGGTGCTTTATCCCGCACCCGTTATTGTCGCGTCAGGCGTTCTCCGC
CTTCGTGCTCGACTGGTTTGTTTTCGGCAACGGTTATCTTGAACGCCGGGTCAACCGGCTGGGCAGCGTGTTGTCCCTGC
GCCACGTTCCGGCAAAGTACACCCGGCGCGGCAGCGACCTGAATACCTATTGGTTTATCCGGCAGTGGAAGGATGAACAC
GCGTTTGATACCGACAGCGTGTGCCACGTCATCAACCCGGATATTAACCAAGAGATCTACGGTATGCCGGAGTACATGGG
CGCGCTGCTGTCGGCCAGCCTGTCGCACTCCGCCGATATGTTCCGCAAGCTCTACTATGACAACGGCTCGCACGCCGGGT
GCATTATCTACATCGGCGCATCCCAGGTGGATACCGAAAGCATGGATAACGTGAAAAAAACGCTGAAGGAAGCACGCGGC
AAAGGCGCGTTTAAAAACCTGCTGTTACACGCGCCGGGCGGCGGTGAAAAAGGGGTACAGATTATTCCCTTCAGCCAGAT
ATCCGCCAAAGATGAATTCCTGAATATCAAATCAGTGACGCGCGATGACATTCTGGCAGCGCACCGCGTACCGCCGCAAC
TGATGGGCGCCATGCCGGAAGGCAACGGTTCTTTTGGCGATGTGGAGAAAGCCGCGCGGGTGTTCGCCATCAACGAACTG
ATGCCGGTGATGGAAGCGCTGAAGCATGTGAATGACTGGCTGGGGATGGAGGTGATCCGCTTCAACCCTTACGCCCTGTT
GAAAGCCGAGTGA

Protein sequence :
MKRKYKPGARPAMTPGQPDMAATLKSDPGLSAFTFDGPYPVRDGHDLLDNMYCADNGRYYDTPVDWYGLARAFGSASWHQ
SALYFKRNALTGCFIPHPLLSRQAFSAFVLDWFVFGNGYLERRVNRLGSVLSLRHVPAKYTRRGSDLNTYWFIRQWKDEH
AFDTDSVCHVINPDINQEIYGMPEYMGALLSASLSHSADMFRKLYYDNGSHAGCIIYIGASQVDTESMDNVKKTLKEARG
KGAFKNLLLHAPGGGEKGVQIIPFSQISAKDEFLNIKSVTRDDILAAHRVPPQLMGAMPEGNGSFGDVEKAARVFAINEL
MPVMEALKHVNDWLGMEVIRFNPYALLKAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4628 NP_458710.1 probable capsid portal protein Not tested SPI-7 Protein 3e-81 50
t4321 NP_807917.1 capsid portal protein Not tested SPI-7 Protein 3e-81 50
unnamed ABR13463.1 predicted capsid packaging protein Not tested PAGI-6 Protein 2e-69 47