Gene Information

Name : Dd703_3300 (Dd703_3300)
Accession : YP_002988884.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3866351 - 3867250 bp
Length : 900 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase; KEGG: eca:ECA0770 site-specific tyrosine recombinase XerD

DNA sequence :
ATGAACGAACAAGACCAGATGCGAATTGAACAGTTCCTGGATGCCGTTTGGCTGGAGCGCAATCTGGCGGAGAATACGCT
GCAGTCCTACCGCCGCGATCTGCGCACGCTGGCGGCGTGGCTGGCCCATCACCACGCCAGCCTGTCTGACGCCCGTCCCG
ATGATCTGCAATCCTTTTTAGCCGAACGGGTGGACGGCGGCTATAAGGCGACCAGCTCCGCCCGTCTGCTGAGCGCTATG
CGGCGCCTGTTTCAGTATCTCTATCGGGAAAAAGTCCGCCCGGATGACCCGAGCGCCGTGCTCTCTTCGCCCAAATTGCC
CCAGCGTCTACCCAAGGATCTGACGGAAGCGCAGGTCGAATCGCTGCTGGCCGCACCGGCCACCGATCAGCCGCTGGAAC
TGCGCGACAAAGCGATGCTGGAGGTGTTGTACGCCACCGGGTTGCGCGTCTCTGAGCTGGTGGGGTTGACGATGAGCGAC
GTCAGCCTGCGCCAGGGTGTGGTGCGCGTGATCGGCAAAGGTAACAAGGAGCGGCTGGTGCCGCTGGGGGAAGAGGCGGT
GTATTGGGTGGAACAGTATCTGGAGTACGGCCGCCCCTGGTTGCTGGACGGGCAAACGCTCGACGTGATGTTCCCCAGCA
CCCGCGGCCGACAAATGACGCGCCAGACTTTCTGGCATCGGATAAAGCACTATGCGGTGCTCGCCAGTATTGACAGCGCC
AGACTTTCTCCGCATGTTTTGCGTCATGCTTTTGCCACTCACCTGCTAAATCACGGTGCGGATTTGCGGGTCGTGCAGAT
GTTGTTGGGGCATAGCGATCTTTCTACTACGCAGATTTATACCCATGTCGCCACAGAGCGTCTGAAACAGCTGCATCAGC
AGCATCATCCACGAGCGTGA

Protein sequence :
MNEQDQMRIEQFLDAVWLERNLAENTLQSYRRDLRTLAAWLAHHHASLSDARPDDLQSFLAERVDGGYKATSSARLLSAM
RRLFQYLYREKVRPDDPSAVLSSPKLPQRLPKDLTEAQVESLLAAPATDQPLELRDKAMLEVLYATGLRVSELVGLTMSD
VSLRQGVVRVIGKGNKERLVPLGEEAVYWVEQYLEYGRPWLLDGQTLDVMFPSTRGRQMTRQTFWHRIKHYAVLASIDSA
RLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 3e-60 57
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 3e-60 57