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Name : Dd703_3273 (Dd703_3273) Accession : YP_002988857.1 Strain : Dickeya dadantii Ech703 Genome accession: NC_012880 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 3833312 - 3835198 bp Length : 1887 bp Strand : + Note : PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: vch:VC0260 mannosyl-transferase DNA sequence : ATGTTTAAACTTATTCCGCTTTTGCTTAATGCAGAACGCGCCACCAAACGCATCGTAACTGTACTCTATGATGTTGTCGC AATTACTATTTCGCTCTATCTGGCCGTTGCCGTCCGTTTAGGCACCACCGATTTCCCCATCGGTTATGCTGAGATAGCCA GCTTCGTCGTCACGTTATCCATCACTATCTTCGTTTTCATACGCTGCGGTATGTACCGTGCCGTACTGCGCTACATGATG CTACCCGCTATAGGATATGTGTTTTTGTCTGTCTTCCTATCCGCCATCAGTCTGGCGCTAAGTAGCTTCTTTTTTCAGTC TTTTGTTCCGCGCAGCGTCCCGTTTATTTATGCAGGTTTAGCGACGCTTGCGCTGGGTAGCCCTCGCGTACTTATCCGAA CATTTTATTACCACTACTATAAGCGTCAGAAACCAAACGTTTTTATCTATGGCGCCGGCGCTACCGGGCGAGACTTGCTC TACGCTCTGATTCAGGGAGATGAGTATCATCCCGTCATTATCCTGGATGATGACGAGAAAAAGATTGGTCAAATTATTTG CGGCATAAAAGTGCATCACAGCAGTGAATTTGAGAAATTGAAACCGTTGTATCACCCGGTTAAATTATTATTAGCCATCA ACAATATACAAAAAGGTCAACGTCTGAGATTGCTGGAGAAACTCTCTCATTGGCCGATCGAAGTACAATCTGTCCCTGCG GTTGAAGACATCGCAGCCGGTAAGGCTACCGCCACAGAAATACGCGATCTGGATGTCGCTGATTTACTTGGAAGAGAAGC TGTTGATCCCGATAGACAGCTAATGGCGAAAAACATTACCAATAAATCAGTGATGGTGACAGGTGCCGGCGGTTCAATTG GTTCCGAACTGTGCCGACAGATTTTGACGCAACGGCCACGAATCTTGGTGCTGTTTGAGCTGAATGAGTACAACCTATAT ACCATCGATCAGGAACTGCAAGGGATTAAAAAACGCCTGATGCTGGCAACAAAAATTGTTACGGCACTCGGGTCGGTACA AAAGCAGAACCGGATTCAAAAGCTAATCCATGCCAACCAAATCGAGACCATCTATCATGCTGCAGCCTATAAACACGTAC CGCTGGTTGAAGACAATGTGATCGAAGGGATTCGCAATAATGTTTTCGGTACCTTAGCCTGCGCCGAAGCCGCAATAGCG GAAGGAGTCAAAAACTTCACGCTGATCTCTACCGACAAAGCTGTGCGCCCGACCAATATTATGGGTGCCAGTAAACGGAT GGCAGAATTAATTTTGCAAGCACTGGCTGAACGGCAAAACCCGACAACATTCACCATGGTGCGTTTCGGCAATGTATTAG GCTCATCAGGTTCCGTCGTCCCGCTGTTTAAAAAACAGATCCGACAAGGTGGCCCGGTAACAGTCACCCACCCAGATATT ATCCGTTACTTCATGTTAATTCCTGAAGCGGCACAACTGGTAATACAAGCGGGCGCCATGGGGATTAATGGACAGGTATT TGTATTAGATATGGGAGAGCCAGTCAAAATACTCGACCTGGCCCGCAGAATGATTAACCTAATGGGCATGAAAGGGTATA TAGAAGGACAGGGGCACGTTGAAGAAGGCGATATAGCGATTAAATTCACGGGATTACGCCCTGGGGAAAAACTCTATGAG GAGTTATTGATCGGTGAAAATGTGGAAGGAACTAGCCATCCCAAAATCATGACCGCACAAGAAGAAAAATTGAGCTGGCA GGACATGGAGTCATTACTGAAAGATCTTGATATGTATTGCCACGACTTCGACGTTAATAAAATTAAAGAGATTCTGCTAC AGGCACCAACAGGTTATAACATCGAGTGTTATAGAGATCCTCATTGA Protein sequence : MFKLIPLLLNAERATKRIVTVLYDVVAITISLYLAVAVRLGTTDFPIGYAEIASFVVTLSITIFVFIRCGMYRAVLRYMM LPAIGYVFLSVFLSAISLALSSFFFQSFVPRSVPFIYAGLATLALGSPRVLIRTFYYHYYKRQKPNVFIYGAGATGRDLL YALIQGDEYHPVIILDDDEKKIGQIICGIKVHHSSEFEKLKPLYHPVKLLLAINNIQKGQRLRLLEKLSHWPIEVQSVPA VEDIAAGKATATEIRDLDVADLLGREAVDPDRQLMAKNITNKSVMVTGAGGSIGSELCRQILTQRPRILVLFELNEYNLY TIDQELQGIKKRLMLATKIVTALGSVQKQNRIQKLIHANQIETIYHAAAYKHVPLVEDNVIEGIRNNVFGTLACAEAAIA EGVKNFTLISTDKAVRPTNIMGASKRMAELILQALAERQNPTTFTMVRFGNVLGSSGSVVPLFKKQIRQGGPVTVTHPDI IRYFMLIPEAAQLVIQAGAMGINGQVFVLDMGEPVKILDLARRMINLMGMKGYIEGQGHVEEGDIAIKFTGLRPGEKLYE ELLIGENVEGTSHPKIMTAQEEKLSWQDMESLLKDLDMYCHDFDVNKIKEILLQAPTGYNIECYRDPH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-76 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd703_3273 | YP_002988857.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 4e-108 | 51 |
| Dd703_3273 | YP_002988857.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 1e-78 | 43 |
