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Name : Dd703_3223 (Dd703_3223) Accession : YP_002988808.1 Strain : Dickeya dadantii Ech703 Genome accession: NC_012880 Putative virulence/resistance : Unknown Product : integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 3775059 - 3776300 bp Length : 1242 bp Strand : + Note : CP4-57 prophage; integrase DNA sequence : ATGGCACGGTTAACAAAACCCCTCACCGATACGGAGATCAAAGCCGCCAAACCACAGGAAGCGGATTACACACTGCATGA CGGCGACGGTCTGCAACTGCTAATCAAAAGCAGCGGCAGGAAAGTCTGGCAAATGCGCTACTACCGGCCTTTAACCAAAA AGCGCGTAAAACTGACTTTTGGCCCTTATCCCGAAGTCACTCTGGCCGACGCACGGCAACGCCGGACAGCGGCCCGCGCC CTGCTGGTAAAAGATATTGACCCTTATGAACACCAGCTTTCATTGCGCAAGCAAGCGCTGGAAACCCAATCCAACACCTT TAAGGTCGTTGCCGAACGCTGGCTACAGTTAAAAAAGAGCAGCGTCACCGCCGACTACGCCTCCGATATCCGGCGCTCCC TCGAAAAGGATATCTTTCCCGCCATCGGCGATATCAGCATCACGGATATCAAAGCGCGCACGCTGGTGCAGGCTATTCAG CCGGTACAGGCCAGAGGCGCGCTGGAAACGGTAAGGCGGTTATGCCAGCGGATTAACGAAGTGATGATCTATGCCATGAA CGTTGGCCTGATCGATGCGGCTCCCAGCGTCAATATCAGCAAGGCGTTCGAGAAACCGCAGAAAAAGCACATGCCCAGTA TCCGCCCGGATCAACTACCGCAACTGATGCAAACGATGCGGCTGGCAAATATCGAGTTACCGACCTGCTGTCTGTTTATG TGGCAGCTTCTCACCCTCACCCGCCCTGTCGAAGCCGCTGAGACGCGCTGGCAAGAGATCGATCTGGATGCTAAAGAATG GCGCATTCCGGCCGAACGCATGAAAATGAAGCGGGTACATATCGTTCCGCTGTCAGAACAAGCACTGGCTATTCTGGAAC TTATGCGGCCTTTAAGCAGCCATCGGGAATATGTTTTCCCCAGCCGCATTAAGCCGTTACAGCCAATGAATAGCCAGACG GTCAACGCCGCGCTGAAACGCGCTGGATTAGGCGGCATTCTGGTATCACACGGCATGCGCTCAATCGCCAGCACCGCGCT CAATGAGCAAGGCTTTCCGCCCGATGTCATCGAAGCCGCCCTCGCCCACGTAGATAAAAATGAAGTACGCCGGGCCTATA ACCGCAGCGACTATCTGGAACAACGTCGCCCCATGATGCAATGGTGGGCTGACTTTGTGAAAGCGGCGGACAACGGCAGC GTGCTGGAAGGCGGGATCCGAGGACTCAAAGCGATTGGGTGA Protein sequence : MARLTKPLTDTEIKAAKPQEADYTLHDGDGLQLLIKSSGRKVWQMRYYRPLTKKRVKLTFGPYPEVTLADARQRRTAARA LLVKDIDPYEHQLSLRKQALETQSNTFKVVAERWLQLKKSSVTADYASDIRRSLEKDIFPAIGDISITDIKARTLVQAIQ PVQARGALETVRRLCQRINEVMIYAMNVGLIDAAPSVNISKAFEKPQKKHMPSIRPDQLPQLMQTMRLANIELPTCCLFM WQLLTLTRPVEAAETRWQEIDLDAKEWRIPAERMKMKRVHIVPLSEQALAILELMRPLSSHREYVFPSRIKPLQPMNSQT VNAALKRAGLGGILVSHGMRSIASTALNEQGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVKAADNGS VLEGGIRGLKAIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 4e-101 | 53 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-100 | 51 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 2e-100 | 51 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 2e-100 | 51 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 2e-100 | 51 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 2e-100 | 51 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 4e-78 | 44 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 4e-78 | 44 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 2e-78 | 44 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 8e-59 | 41 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 8e-59 | 41 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 1e-58 | 41 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 1e-58 | 41 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 4e-59 | 41 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 2e-60 | 41 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 4e-59 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd703_3223 | YP_002988808.1 | integrase | VFG1092 | Protein | 2e-78 | 44 |
| Dd703_3223 | YP_002988808.1 | integrase | VFG0783 | Protein | 4e-59 | 41 |
