Gene Information

Name : Dd703_2915 (Dd703_2915)
Accession : YP_002988512.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator PhoB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3399781 - 3400470 bp
Length : 690 bp
Strand : -
Note : KEGG: eca:ECA1110 phosphate regulon response regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGGCAAGACGTATTTTGGTGGTAGAGGATGAAGCGCCCATTCGTGAGATGGTGTGCTTTGTGCTGGAGCAAAACGGTTA
TCAGCCGGTGGAAGCCGAGGATTACGACGTCGCTGTTTCCCGGCTGGCGGAACCGTATCCCGAGCTGGTGCTGCTGGATT
GGATGCTGCCGGGCGGTTCCGGTTTGCAGTTCATCAAGCATATGAAACGCGAAGCGTTGACCCGCGATATTCCCGTCATG
ATGTTGACCGCTCGCGGCGAGGAAGAGGATCGGGTACGCGGCCTGGAAGTGGGGGCCGACGATTATATTACCAAGCCGTT
TTCGCCCAAAGAGCTGGTGGCGCGCATTAAGGCGGTCATGCGCCGGATTTCGCCGATGGCGGTGGAAGAGGTGATCGAGA
TGCGCGGCCTGAGCCTGGATCCGTCTTCGCATCGCGTGACTACCGAAGAGTACGCGCTGGATATGGGGCCGACCGAATTT
AAGCTGTTGCACTTTTTTATGACTCATCCTGAACGGGTGTACAGCCGTGAGCAGTTGCTGAATCATGTCTGGGGCACTAA
CGTTTATGTTGAGGATCGCACTGTGGACGTTCATATCCGCCGCCTGCGCAAAGCGCTGGAAACTACCGGGCATGACAAGA
TGGTGCAGACGGTTCGTGGAACCGGATACCGTTTTTCAACGCGCTACTGA

Protein sequence : 
MARRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDVAVSRLAEPYPELVLLDWMLPGGSGLQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMRGLSLDPSSHRVTTEEYALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETTGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-33 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_2915 YP_002988512.1 winged helix family two component transcriptional regulator PhoB HE999704.1.gene2815. Protein 1e-38 43
Dd703_2915 YP_002988512.1 winged helix family two component transcriptional regulator PhoB CP001138.1.gene2239. Protein 2e-33 41
Dd703_2915 YP_002988512.1 winged helix family two component transcriptional regulator PhoB CP000647.1.gene2531. Protein 1e-34 41
Dd703_2915 YP_002988512.1 winged helix family two component transcriptional regulator PhoB BAC0596 Protein 2e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_2915 YP_002988512.1 winged helix family two component transcriptional regulator PhoB VFG1563 Protein 1e-33 41
Dd703_2915 YP_002988512.1 winged helix family two component transcriptional regulator PhoB VFG1702 Protein 1e-33 41