Gene Information

Name : Dd703_2899 (Dd703_2899)
Accession : YP_002988496.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 3.5.4.26
Position : 3379553 - 3380665 bp
Length : 1113 bp
Strand : -
Note : KEGG: eca:ECA1126 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminas

DNA sequence :
ATGTCCGTACTGTCTGATGAATTTTATATGGCCCGTGCGTTGGAACTGGCCCGTCGCGGGATTTTTACGACCTCGCCCAA
CCCGAATGTAGGGTGTGTGATCGTCAGGGATGGCGAAGTCGTCGGCGAAGGGTTTCATCAAAAAGCAGGGGAGCCGCACG
CGGAAGTGCATGCGCTGCGAATGGCCGGGGATAAAGCACAAGGCGCTACGGTTTACGTGACGCTGGAGCCTTGTAGCCAT
CACGGCCGAACACCGCCTTGTGCCGATGCTTTGATTGCCGCCGGGGTGGCGCGAGTGGTCGCAGCGATGCAGGATCCCAA
CCCCCAGGTAGCGGGACGCGGCCTGCATCGATTGCATCAGGCCGGTATCGAGGTGTGCCATGGCGTGATGGCGGATGCGG
CGGAAAACATCAATCGTGGTTTTCTCAAGCGTATGCGTACCGGTTTCCCTTATGTACAACTCAAGATGGGCGCCTCTGTG
GACGGGCGCACTGCCATGGCGTCCGGCGAAAGCCAGTGGATTACCTCGCCACAGGCCAGGCAGGATGTACAACGCTTTCG
CGCCCGCAGTTCGGCAATCCTCAGTAGCAGCGCCACCGTGTTGGCCGACGACCCATCGCTGGCGGTTCGCTGGCAGGAAC
TGGATGCCGACACGCAGCGTATCTACCCACAGGAGAGTTTGCGCCAGCCGGTGCGGATCATTGTCGATAGCCAGTCGCGT
GTGACGCCGGAACATCGTCTGGTAAGCCAACCCGGTTCCACCTGGCTTGCCAGGCCACAGCGGGATGGGTTGGCATGGCC
GTCGTCAGTGGAGCAGATCGACGTACCGTTGTATGGCGAAGGGCTGGATCTGGTCGCGTTGATGATGTTGCTGGGCAAAC
GTCAGATTAATTCCGTTTGGGTTGAAGCAGGGCCACGTCTGGCTGGGGCGTTATTGCAAGCCAATGTCGTGGATGAACTG
ATTGTGTATATAGCGCCGCGCCTGCTGGGAGATGCCGCCAGACCCTTGTGTGTGCTGTCGGGAGTAGAAACGCTCTCGCA
GACGCCCGAGTTTTTGATCGCAGACGTTTGCCAGGTTGGGCCGGATGTGCGCCTGACGCTAAAACCCCGTTAA

Protein sequence :
MSVLSDEFYMARALELARRGIFTTSPNPNVGCVIVRDGEVVGEGFHQKAGEPHAEVHALRMAGDKAQGATVYVTLEPCSH
HGRTPPCADALIAAGVARVVAAMQDPNPQVAGRGLHRLHQAGIEVCHGVMADAAENINRGFLKRMRTGFPYVQLKMGASV
DGRTAMASGESQWITSPQARQDVQRFRARSSAILSSSATVLADDPSLAVRWQELDADTQRIYPQESLRQPVRIIVDSQSR
VTPEHRLVSQPGSTWLARPQRDGLAWPSSVEQIDVPLYGEGLDLVALMMLLGKRQINSVWVEAGPRLAGALLQANVVDEL
IVYIAPRLLGDAARPLCVLSGVETLSQTPEFLIADVCQVGPDVRLTLKPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 2e-66 49
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 2e-66 49