Gene Information

Name : Dd703_2679 (Dd703_2679)
Accession : YP_002988278.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 3133881 - 3135047 bp
Length : 1167 bp
Strand : -
Note : KEGG: abu:Abu_0659 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; NAD-dependent glycerol-3-phos

DNA sequence :
GTGAAAATAGCAATAGCTGGTACTGGGTATGTTGGATTGTCAATAGGTGTATTGCTTGCGCAACATAATGAAGTTGTTGC
GCTAGATATTATTCCTGAAAAAGTTGACATGCTTAATCGCAAAGACTCACCCATTGTCGATGCAGAAATACAGGATTATC
TCAGAAATCGCGATCTTAACTTTCGTGCAACGCTCGATAAAAATGAAGCTTATGAAAATGCTGATTTTGTCGTCATCGCG
ACGCCTACGGATTATGATCCTGAGACGAACTATTTTAATACTAAGTCTATTGAGTCTGTCATTCGGGATGTGATTGCGAT
TAACCCCAGTGCAACAATGGTCATCAAGTCGACTATTCCTGTTGGGTATACTCTGAAGACACGTCAGGCATTAGGAACTG
ATAATCTTATATTTTCGCCAGAGTTTCTGCGTGAAGGGCGTGCTTTATATGACAATTTGCACCCTTCCCGGATCGTCGTT
GGCGAATGCTCCGAACGAGCTAAGGTTTTTGCAGGGCTTCTGGAGCAAGGCGCCATTAAAAAAGATATCTCGGTGATATT
CACCGGTGCAACGGAAGCCGAAGCAATTAAACTGTTTGCTAACACCTACTTGGCAATGCGGGTATCGTATTTCAATGAGC
TTGATACTTATGCTGCGACTCATGAGTTGAACACCAGTCAGATTATTCACGGTGTTTGTCTGGATCCTCGTATCGGTGCT
CATTATAACAATCCTTCATTTGGCTACGGCGGTTATTGTTTGCCAAAAGATACCAAACAATTGCTTGCAAATTATAGCGA
TGTGCCTCAAAACCTTATCAATGCGATTGTTGAATCGAATGTTACTCGCAAGGATTTTATTGCGTCGGATATTCTTAAAA
GCAACCCCAGAGTTGTCGGTGTTTACAGGCTGATAATGAAGAGTGGTTCGGATAATTTTCGATCATCCAGTATTCAAGGA
ATAATGAAACGCATAAAAGCGAAAGGAATCGAAGTTATTATTTATGAGCCAGCAATTAGTAAGAGTGAATTTTTTAATTC
GCGCGTCATGACTGACTTGAATGAGTTTAAAGAAAAAGCCGATATCATCATCAGCAATAGAATGTCAGATGTGCTCCAGG
ATGTTGCCGATAAGGTTTATAGCCGGGATCTTTTTGGTAACGATTGA

Protein sequence :
MKIAIAGTGYVGLSIGVLLAQHNEVVALDIIPEKVDMLNRKDSPIVDAEIQDYLRNRDLNFRATLDKNEAYENADFVVIA
TPTDYDPETNYFNTKSIESVIRDVIAINPSATMVIKSTIPVGYTLKTRQALGTDNLIFSPEFLREGRALYDNLHPSRIVV
GECSERAKVFAGLLEQGAIKKDISVIFTGATEAEAIKLFANTYLAMRVSYFNELDTYAATHELNTSQIIHGVCLDPRIGA
HYNNPSFGYGGYCLPKDTKQLLANYSDVPQNLINAIVESNVTRKDFIASDILKSNPRVVGVYRLIMKSGSDNFRSSSIQG
IMKRIKAKGIEVIIYEPAISKSEFFNSRVMTDLNEFKEKADIIISNRMSDVLQDVADKVYSRDLFGND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-89 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_2679 YP_002988278.1 nucleotide sugar dehydrogenase VFG0963 Protein 6e-103 56