Gene Information

Name : Dd703_2580 (Dd703_2580)
Accession : YP_002988179.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3025261 - 3025956 bp
Length : 696 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: plu:plu3179 two-component response regulator

DNA sequence : 
ATGGATAACGAGACAACGGCGATGCGACTATTACTGGTTGAAGATCATGATGAACTGGCCCATTGGCTGGAGAAAGCGCT
TAGCGAGTCCGGCTTTGCTGTGGATCGTGCCGGCGATGGCATGACGGCGGAGCAGTTGCTGCAGCTCGAGACCTATACGC
TGATGGTGCTTGATGTCTCGTTACCGAAAATGGATGGTTTTTCTGTGCTGGCGCGCTTACGAAAGCGGGGGCAAAACCTG
CCGGTCTTGTTGTTGACGGCGCGCACCGACGTCGCGGATCGGGTGCGGGGGCTGAATCTGGGGGCGGATGACTATCTGGC
CAAGCCGTTCGATGTGGCTGAACTGGAAGCCCGACTGCGGGCCTTATTGCGACGTAGTCAGGGGTTAGCGCAGTCTGTCC
AGCATTTTGGCGACTTGAGCTGGCATGATGAGGGGTATTTTTTGCTGTGGGGGAAACCGTTGGCATTGACGCCGCGAGAG
CAGGCTGTGTTGCATACCCTGATGCAACGACGAGGGCGGCCGGTGTTGCGTCAGTATCTGTATGAACAGGTCTTTACGTT
TTTGGATGACGTCAGTATCGATAGCCTGGATCTGTATGTTCATCGGGTGCGGAAAAAACTGGCTGGCAGCAATGTGGCGA
TCGTCACCCTGAGGGGGTTGGGGTACAGCCTGGAGTGCGAACATGCCAAAGGTTGA

Protein sequence : 
MDNETTAMRLLLVEDHDELAHWLEKALSESGFAVDRAGDGMTAEQLLQLETYTLMVLDVSLPKMDGFSVLARLRKRGQNL
PVLLLTARTDVADRVRGLNLGADDYLAKPFDVAELEARLRALLRRSQGLAQSVQHFGDLSWHDEGYFLLWGKPLALTPRE
QAVLHTLMQRRGRPVLRQYLYEQVFTFLDDVSIDSLDLYVHRVRKKLAGSNVAIVTLRGLGYSLECEHAKG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 3e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_2580 YP_002988179.1 winged helix family two component transcriptional regulator BAC0487 Protein 1e-27 44
Dd703_2580 YP_002988179.1 winged helix family two component transcriptional regulator BAC0125 Protein 9e-25 42
Dd703_2580 YP_002988179.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-24 41
Dd703_2580 YP_002988179.1 winged helix family two component transcriptional regulator BAC0197 Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_2580 YP_002988179.1 winged helix family two component transcriptional regulator VFG0473 Protein 4e-28 42