|
Name : Dd703_2362 (Dd703_2362) Accession : YP_002987967.1 Strain : Dickeya dadantii Ech703 Genome accession: NC_012880 Putative virulence/resistance : Unknown Product : integrase family protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0582 EC number : - Position : 2778795 - 2780045 bp Length : 1251 bp Strand : + Note : PFAM: integrase family protein; KEGG: eca:ECA2750 prophage integrase DNA sequence : ATGGCAATTCAGGCAAAGCCCCTCACCAACACGGAAGTCAAAGCCGCCAAAGCGACGGATAAAGAATTGTCATTGCATGA CGGCGGCGGGCTGCTGCTGTTCGTCAAACCATCTGGTACAAAAACCTGGCGCTTTCGCTATTACCATCCACAGACCAAAA AGCGGACTACGCTCACCTTTGGCAGTTATCCAGCGCTCTCTTTGGCCGACGCCCGCCAAATGCGCGAAGCAGCCAAAGCA CTTTTAGAAAAAGGCATCGATCCGCAATTCCACCAGCAACAGCAGCGCGAACAAGAACAGGCAATCAGCCTGAACACGTT CGCCAAAGTCGCCGCCGACTGGTATGAAGTGAAAAAATCTCAACCGCTGGCCGCAAACACCATTAAAGATATCTGGCGCT CCCTGGAAAAGTACGTGTTCCCGTTCATCGCAAACCAGCCTATCAGCCAGCTTACCGCCCGCCATTTCATCACCGCATTG GAACCGATACAGGCCAGCGGCAAACTGGAAACCGTTAAACGGGTTAGCCAGCGTATTAACGAAGTGATGGATTATGCCGT TAACTCAGGTCTGATACCGGCTAACCCGGCGGCGAAGATCCGCAAAGCATTTCAGACGCCGGTGAAAACCCATATGCCGA CCATCCGGCCAGAGGCATTACCTAGCCTGATGAAAACGCTATCGGTCGCCAGCATCGAGCTACAAACCCGGTTATTGATT GAATGGCAATTGTTGACCGTTGCTCGCCCGGCTGAAGCCGCAGAAACCCGCTGGAGCGAGATAGACCTTACGCAGAACAC CTGGACAATCCCGGCAGGCCGCATGAAGATGCGCCGCGAGCACGTCATTCCCCTGCTCCCACAAGCGTTAGCCATTCTGG ACGCCATGAAGCCAATCAGCGGGCACCGGGAATATCTGTTCCCTTCCGCTAAAGACCCCAAACAGCCAATGAACAGCCAA ACCGCTAACGCCGCATTGCGTCGCATGGGCTACAAAGGCGTGCTGGTGTCCCACGGCTTGCGCGCTATCTTCAGTACCGC CGCCAACGAAGCAGGCTTCCCGCCAGACGTCATCGAAGCCGCGCTAGCTCACGTTGACACCAATGAAGTGCGCCGCGCTT ACAACCGCTCCACCTATCTGGAGCAACGCAAGGTACTGATGTGCTGGTGGGGTGAGTTTGTTGAAACCGCCGCCACCGGT AAGGCGATGGCCGCAGACGGCGCAAAAGGGCTACGAGTGATTAACGCCTAA Protein sequence : MAIQAKPLTNTEVKAAKATDKELSLHDGGGLLLFVKPSGTKTWRFRYYHPQTKKRTTLTFGSYPALSLADARQMREAAKA LLEKGIDPQFHQQQQREQEQAISLNTFAKVAADWYEVKKSQPLAANTIKDIWRSLEKYVFPFIANQPISQLTARHFITAL EPIQASGKLETVKRVSQRINEVMDYAVNSGLIPANPAAKIRKAFQTPVKTHMPTIRPEALPSLMKTLSVASIELQTRLLI EWQLLTVARPAEAAETRWSEIDLTQNTWTIPAGRMKMRREHVIPLLPQALAILDAMKPISGHREYLFPSAKDPKQPMNSQ TANAALRRMGYKGVLVSHGLRAIFSTAANEAGFPPDVIEAALAHVDTNEVRRAYNRSTYLEQRKVLMCWWGEFVETAATG KAMAADGAKGLRVINA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0516 | NP_230167.1 | phage integrase | Not tested | VSP-2 | Protein | 2e-98 | 54 |
| VC0395_A0372 | YP_001216328.1 | phage family integrase | Not tested | VPI-1 | Protein | 3e-103 | 53 |
| int | AAK20773.1 | integrase | Not tested | VPI | Protein | 2e-103 | 53 |
| int | AAK20803.1 | integrase | Not tested | VPI | Protein | 2e-103 | 53 |
| unnamed | AAA82714.1 | integrase | Not tested | VPI | Protein | 2e-103 | 53 |
| VC0847 | NP_230494.1 | phage family integrase | Not tested | VPI-1 | Protein | 3e-103 | 53 |
| VPI2_0001 | ACA01818.1 | phage family integrase | Not tested | VPI-2 | Protein | 7e-94 | 50 |
| VC1758 | NP_231394.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-93 | 50 |
| VC0395_A1357 | YP_001217300.1 | phage family integrase | Not tested | VPI-2 | Protein | 1e-93 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd703_2362 | YP_002987967.1 | integrase family protein | VFG1092 | Protein | 6e-94 | 50 |
