Gene Information

Name : Dd703_1966 (Dd703_1966)
Accession : YP_002987578.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : -
Position : 2336078 - 2338000 bp
Length : 1923 bp
Strand : -
Note : decatenates replicating daughter chromosomes

DNA sequence :
ATGCGTTTGTTTATTGCCGAAAAACCCAGCCTGGCCCGAGCTATCGCCGATGTGTTGCCCAAGCCGCAGCGACGTGGCGA
AGGGTTCATTGCCTGCGGGCAACATGATGTGGTGACTTGGTGCGTCGGGCATTTGCTGGAACAGGCGGAGCCTGAGCGCT
ACGATCCTCGCTATGCACGCTGGACGCTGGCGGATCTGCCCATCGTGCCGCAGAAATGGCTGTTGCAACCGAGGCCTTCC
GTCAGTAAGCAGTTGAAGGCGATCGGGCAACTGCTAAAGCAGGCCGATGAGATTGTTCATGCCGGCGACCCGGATCGTGA
AGGGCAACTGCTGGTGGATGAAGTGCTGGAGTATCTGGCGCTGTCTGAAGAAAAACGCGGCCAGGTACGCCGTTGTTTGA
TTAACGATCTCAATCCCCAGGCGGTGGAACGCGCAATCTCGCGCCTGCGTGAAAACCGCGAATTTGTCCCGCTGTGCGTG
TCGGCATTAGCCCGTTCCCGCGCCGATTGGTTGTACGGGATCAATATGACCCGCGCGTATACGCTGTTGGGGCGGAATGC
CGGGTATGACGGCGTATTGTCGGTGGGGCGGGTGCAGACGCCGGTGCTGGGGTTGGTGGTTCGGCGCGACGAGGAAATAG
AAAATTTTGTGCCCCGCGACTACTTCGAAGTTAAGGCGCACATCGTCACACCGGCGGAAGAGCGCTTCGTCGCGATGTGG
CAACCCAGCGAATCCTGTGAGCCTTATCAGGATGAAGAAGGGCGGCTGCTGCATCGGCCACTGGCGGAGCATGTGGCGCG
TCGAATTGAAGGGCAGCCGGCGCAAGTCATTGCGTATAATGATAAACGGGAATCAGAAACTGCGCCGTTGCCGTATTCGT
TGTCCGCGCTGCAGATAGAAGCGGCTAAACGATATGGGCTGAGCGCACAGCAAGTGCTGGATATTTGCCAGAAACTGTAT
GAAACCCACAAACTGATTACCTACCCACGTTCAGATTGTCGCTACCTGCCGGAAGAACATTTCGCCGGGCGGCAGGCGGT
AATGAATGCGATTGCGGCGCACCGGCCGGATATGCTGCCGCAGCCTGCCGTGGATAGTGAGCGCCGTAATCGTTGTTGGG
ATGACAGCAAGGTGGATGCGCATCACGCGATTATTCCTACGGCACGCAGCGCTCGCGTTACGCTGACGGAATCGGAAAAC
CAGGTTTATGGGCTGGTCGCCCGCCAGTATCTGATGCAGTTTTGCGCCGATGCGGTATTCCGTAAATGCGTGATTGAACT
GGAGATTGCCGGCGGCAAGTTTGTGGCCAAGGCGCGGTTTTTGGCTGAAGCCGGTTGGCGGACACTGCTTGGCGGCAAAG
AGCGGGATGAGGACAACGAAGGTACGCCGTTGCCGGTGGTTTCCAAAGGCGATGCGCTGTTGTGTGAACGCGGTGAGGTG
GTCGATCGCCAGACGCAGCCGCCACGGCCATTCACCGATGCCACGTTACTGTCCGCCATGACCGGTATCGCACGCTTTGT
TCAGGATAAGGATTTGAAGAAAATTCTGCGGGCGACGGATGGCTTGGGGACGGAAGCGACCCGAGCCGGTATCATCGAAT
TGCTGTTTAAACGCGCATTTTTGTTCAAGAAGGGGCGTTCTATTCACGCGACGGAAGCGGGCAGAGCGCTTATTCATGCC
TTGCCGCCCAGCGCCGCCCACCCGGATATGACTGCCCATTGGGAGTCGACGCTGACGCAAATCAGCGAGAAACGCTGCCG
TTATCAGGATTTCATGCAACCGCTCACGCAGTCGCTCTATTCTCTGATTCAGCAAGCGCAACAGACGAGTAATATGAGTA
TGTTCAGCGGGTTGCCGCCGACGAAACGGGCAACCGCAAAACGGCGCAAGCCATCGTCCAGGGCAAAGGAGCAACAGTCA
TGA

Protein sequence :
MRLFIAEKPSLARAIADVLPKPQRRGEGFIACGQHDVVTWCVGHLLEQAEPERYDPRYARWTLADLPIVPQKWLLQPRPS
VSKQLKAIGQLLKQADEIVHAGDPDREGQLLVDEVLEYLALSEEKRGQVRRCLINDLNPQAVERAISRLRENREFVPLCV
SALARSRADWLYGINMTRAYTLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVPRDYFEVKAHIVTPAEERFVAMW
QPSESCEPYQDEEGRLLHRPLAEHVARRIEGQPAQVIAYNDKRESETAPLPYSLSALQIEAAKRYGLSAQQVLDICQKLY
ETHKLITYPRSDCRYLPEEHFAGRQAVMNAIAAHRPDMLPQPAVDSERRNRCWDDSKVDAHHAIIPTARSARVTLTESEN
QVYGLVARQYLMQFCADAVFRKCVIELEIAGGKFVAKARFLAEAGWRTLLGGKERDEDNEGTPLPVVSKGDALLCERGEV
VDRQTQPPRPFTDATLLSAMTGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRAFLFKKGRSIHATEAGRALIHA
LPPSAAHPDMTAHWESTLTQISEKRCRYQDFMQPLTQSLYSLIQQAQQTSNMSMFSGLPPTKRATAKRRKPSSRAKEQQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 1e-111 42
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 5e-105 41