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Name : pspF (Dd703_1721) Accession : YP_002987340.1 Strain : Dickeya dadantii Ech703 Genome accession: NC_012880 Putative virulence/resistance : Virulence Product : phage shock protein operon transcriptional activator Function : - COG functional category : K : Transcription COG ID : COG1221 EC number : - Position : 2048469 - 2049464 bp Length : 996 bp Strand : - Note : transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor DNA sequence : ATGACTCACGACAATGAATCCCTGCTGGGCGAAGCCAATCGCTTTTTGGAGGTACTGGAGCAGGTCTCCCAGCTGGCGCC GCTTAACAAACCGGTTCTGGTGATTGGCGAACGCGGTACCGGCAAGGAGCTGATCGCCAGCCGCCTGCATTATCTCTCCG CTCGCTGGCAAGGCGCGTTCATTTCCCTCAACTGCGCTGCGCTGAACGAAAATCTGCTGGATTCAGAACTATTCGGTCAT GAAGCCGGCGCGTTCACCGGCGCACAACGGCGTCATCTGGGGCGATTTGAGCGCGCGGACGGCGGTACGCTGTTTCTTGA CGAACTGGCGACCGCGCCGATGCTGGTGCAGGAAAAACTGTTGCGGGTGATCGAATACGGTGTGCTGGAGCGCGTGGGCG GCAGCCAACCGCTACAGGTGGACGTGCGTTTGGTTTGTGCCACCAACGAGGATCTGCCGGCGCTGGCGGCGGCTGGCAAG TTCCGCGCCGATCTGCTTGACCGGCTGGCATTTGACGTGGTGCACCTGCCGCCGCTACGGGCGCGTCAGCAAGACATCAT GTTGCTCGCACAGCATTTCGCAGTCCAAATGTGCCGTGAATTGCGGCTGCCGCTGTTTCCCGGTTTTACCCCCAATGCCG AGCACATTTTGCTCAGCTACCCTTGGCCCGGCAACATTCGCGAGTTGAAAAACGTAGTGGAACGCTCGGTCTACCGTCAC GGCGACAGCGAGCAGGCGCTGGATCGCATCATCCTCAACCCGTTCCAGTCGCAGACATTCCCCGCCATCGAGGCGAAAAC CGCCGCCGCGCCAACAGCCCTGCCCGCACTGCCACTGGATCTACGCAGCTGGCAGCACGACCAGGAACAACAGCTGGTGC GGCAGGCGTTGCAGCAAGCCCGCTTCAACCAGCGCAAGGCGGCGGAACTGCTGGGTGTGACCTACCATCAATACCGCGGC CTGTTGAAGAAACACGCCATGAGTGATGATGAATAA Protein sequence : MTHDNESLLGEANRFLEVLEQVSQLAPLNKPVLVIGERGTGKELIASRLHYLSARWQGAFISLNCAALNENLLDSELFGH EAGAFTGAQRRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGVLERVGGSQPLQVDVRLVCATNEDLPALAAAGK FRADLLDRLAFDVVHLPPLRARQQDIMLLAQHFAVQMCRELRLPLFPGFTPNAEHILLSYPWPGNIRELKNVVERSVYRH GDSEQALDRIILNPFQSQTFPAIEAKTAAAPTALPALPLDLRSWQHDQEQQLVRQALQQARFNQRKAAELLGVTYHQYRG LLKKHAMSDDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 8e-34 | 42 |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 1e-33 | 41 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 1e-33 | 41 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 3e-34 | 41 |
