Gene Information

Name : Dd703_1126 (Dd703_1126)
Accession : YP_002986753.1
Strain : Dickeya dadantii Ech703
Genome accession: NC_012880
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional activator KdpE
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1289141 - 1289821 bp
Length : 681 bp
Strand : -
Note : response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport

DNA sequence :
TTGCAGACCAACATACTGATCGTGGAAGACGAGAGAGAGATCCGCCGCTTCTTGCGCAACGCGCTGGAAAGCGAGGGGTG
CCGTGTTTTCGATGCCGAAACCCTGCAACGCGGCCTGATTGAGGCGGCGACCCGCAAACCCGACCTGATTATTCTCGATC
TGGGCCTGCCGGACGGCGACGGTATCGACTATATCCGCGATCTGCGCCAGTGGAGCGCCATTCCAATTATCGTGCTTTCC
GCCCGCACCGATGAACAGGACAAGATCGACGCGCTGGACGCCGGCGCGGAAGATTATCTGACCAAACCCTTTGGCATCGG
CGAATTGCTGGCCCGCGTGCGGGTCGCGCTGCGTCGCGCCAGCACTGCGCCGCAGTCTTCGCCACTGATCGTCTTTTCCG
ATGTCACCGTCGATCTGGTCAATCGCCAGGTCAGCCGCGCCGATGAGGCGATCCATCTCACCCCCATCGAGTTCCGGTTG
CTGGCCACCCTGCTTGCCAATCCCGGCAAGGTGCTGACCCAACGCCAGTTGCTCAATCAGGTATGGGGGCCGAATGCGGT
GGAGCACAGCCACTACCTGCGTATTTATATGGGCCATCTGCGCCAGAAACTGGAACAAGACCCGGCGCGTCCCCGTCACT
TTATTACCGAAACCGCCATCGGCTACCGCTTTATGCCTTAG

Protein sequence :
MQTNILIVEDEREIRRFLRNALESEGCRVFDAETLQRGLIEAATRKPDLIILDLGLPDGDGIDYIRDLRQWSAIPIIVLS
ARTDEQDKIDALDAGAEDYLTKPFGIGELLARVRVALRRASTAPQSSPLIVFSDVTVDLVNRQVSRADEAIHLTPIEFRL
LATLLANPGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETAIGYRFMP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 6e-19 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 1e-18 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 2e-18 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 2e-18 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 2e-18 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 2e-18 42
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-25 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd703_1126 YP_002986753.1 DNA-binding transcriptional activator KdpE VFG1390 Protein 1e-23 41