Gene Information

Name : Rleg_6874 (Rleg_6874)
Accession : YP_002984870.1
Strain :
Genome accession: NC_012858
Putative virulence/resistance : Unknown
Product : ABC transporter
Function : -
COG functional category : R : General function prediction only
COG ID : COG4172
EC number : -
Position : 325577 - 327244 bp
Length : 1668 bp
Strand : -
Note : PFAM: ABC transporter; SMART: AAA ATPase; KEGG: ret:RHE_PE00093 peptide ABC transporter, ATP-binding protein

DNA sequence :
ATGGCTCTCGCACTGGTCAATTCCTTCGCCCCGCCCGTCCGCCACGATCATGATGGCCGTTCGGACACGCCTGTTATCGA
CGCCCGCAATGTGGCGGTGAATTTCAAGGTCGAGGACGGCATGGTCGAAGCCGTCAAGGACGTCTCCTTCCAGCTCTATC
GCGGCGAGACGATCGCCATCGTCGGCGAATCCGGTTCCGGCAAATCGGTGACGGCTCGAACGGTGATGGGGCTGTTATCA
AAGCGCGCCGTCGTCTCCGAGAAATCGACGGTCGCCTATGACGGCAGCAATATCCTGAAATTTTCCGAGCGGGAGCGCCG
CAAGCTGCGCGGCGACCGCATTTCGATGATCTTCCAGGAACCGATGAGCTCGCTGAACCCGATCTATACGATCGGCAGCC
AGATTGTCGAGGCGATCCGCGTGCATCGCCGGATCAGCAAGCGGGATGCGCAAAAGCGGGCGCTCGAACTGCTGGAGCAT
GTGCAGATCCCCGATCCCGCCGCGCGGCTGATGCAATATCCGCATCAGCTTTCGGGCGGCCAGCGCCAGCGCGTGATGAT
CGCCATGGCGCTTGCCAACGATCCCGACGTGTTGATCGCCGACGAGCCGACGACGGCGCTCGACGTCACCGTGCAGGCGC
AGATCCTGAACCTGATCCGCAACCTGCAGAAGGAACTGGGGATGGCCGTCATCCTCATCACCCACGACCTGACCGTGGTG
CGGCAGTTTTCCGATTACGTCTATGTGATGCAGTACGGCGAAGTGCGCGAGCACAACACCACCGAAGCCCTGTTTGCCAA
CCCGCAGGACGCCTATACCAAGCATCTGCTTGCCTCCGAGCCGCGGGGCGAGGCCAATCCACTGCCCGAAGGGTCGGATG
TCATCCTCGATGCCAAGGGTGTGCGGGTCTCCTTCATGATGCGTCACGGTACTTTTCTCAAGCCGGCGATGCGTGAGCTT
GTCGCCGTCGACAGCCTCGACCTGACGCTTCGCCGTCACGAGACGCTGGGGCTGGTGGGCGAATCCGGTTCCGGCAAGAC
GACGTTCGGCCAGGCGATCCTGCGACTGAACACGCCCGACAGCGGCGAGATCCGCTTCGACAATCAGCCGATCCATGGCC
TATCCAGGGCCGAGATGCGGCCCTTGCGCGCCCGCATGCAGGTGGTGTTCCAGGACCCGTTCTCATCGCTCAATCCGCGC
ATGACGATCGGCCAAATCATCGAGGAGGGGCTGGTCGTCAACCGGCTGGGCGCGACCAAGGCCGAACGGCAGGATCGGGT
GCGTGAAGCGCTTGTCGCCGCCGGCATGCCCGGCAATATCCTGTCGCGCTTCCCGCACGAATTTTCCGGCGGCCAGCGCC
AGCGCATCGCCATTGCCCGCGCCATTGCGCTGGAGCCGGAATTCATCCTGCTCGACGAGCCGACATCGGCGCTCGACCTT
TCCGTCCAGGCGCAGATCATCGAACTCTTGCGCAAGCTGCAGGACGAACGTGGCCTGAGCTACCTCTTCATCTCCCACGA
CCTCAAGGTCGTGCGCGCGCTCTGCCATCGCGTCATCGTCATGCAGCATGGCAAGATCGTCGAAGAGGGTCCCGTCAACG
AAGTTTTGTCCCATCCCAAGACCGCTTACACCGAACGGCTCGTCAAGGCCGCTTTCGAGGTAGCATGA

Protein sequence :
MALALVNSFAPPVRHDHDGRSDTPVIDARNVAVNFKVEDGMVEAVKDVSFQLYRGETIAIVGESGSGKSVTARTVMGLLS
KRAVVSEKSTVAYDGSNILKFSERERRKLRGDRISMIFQEPMSSLNPIYTIGSQIVEAIRVHRRISKRDAQKRALELLEH
VQIPDPAARLMQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRNLQKELGMAVILITHDLTVV
RQFSDYVYVMQYGEVREHNTTEALFANPQDAYTKHLLASEPRGEANPLPEGSDVILDAKGVRVSFMMRHGTFLKPAMREL
VAVDSLDLTLRRHETLGLVGESGSGKTTFGQAILRLNTPDSGEIRFDNQPIHGLSRAEMRPLRARMQVVFQDPFSSLNPR
MTIGQIIEEGLVVNRLGATKAERQDRVREALVAAGMPGNILSRFPHEFSGGQRQRIAIARAIALEPEFILLDEPTSALDL
SVQAQIIELLRKLQDERGLSYLFISHDLKVVRALCHRVIVMQHGKIVEEGPVNEVLSHPKTAYTERLVKAAFEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-78 43
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-78 43
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 7e-78 43
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 7e-78 43
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 3e-98 42