Gene Information

Name : Rpic12D_4440 (Rpic12D_4440)
Accession : YP_002984354.1
Strain :
Genome accession: NC_012857
Putative virulence/resistance : Unknown
Product : phytanoyl-CoA dioxygenase
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG5285
EC number : -
Position : 1079259 - 1080137 bp
Length : 879 bp
Strand : +
Note : PFAM: phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_C6790 phytanoyl-CoA dioxygenase

DNA sequence :
ATGTCCGTCAAGCGTTTCCCCAATTCAGCAGCGCCCTCTGAACTCGCGTCCGTCATTGAAGAAGACGGCGGTGCGATCGT
GAAGGGCTTCCTCAGCCCCAGCCTGCTCGAACACCTGAAGAAGGACCTTCTTCCGATGCTCGAAACCACGCCGAATGGGG
TGGACGAATACTTTGCCGGTACGCAAACGCGGCGGCTGTCACGTCTGTTTGCCCGCACCGATCATATGGTCGACGTCGCG
CTGAACCCGCTGTATCTCGAAACCGCACGCCTCATTCTGCAGAAGCCGATCAAGCTCTGGAGCGGTGAGAACCAGGTCGA
GGTGGCCCCCGATATTCAGGTGGGTGTGACGCAGGCTATCCAGATTCGACCTGGTCAGGGCATGCAGCCGTTGCATCGCG
ACGATTCGGTCTGGCTGTGGCGGCACCCTGGCTACAAGCGGGAAGCTCGCGTGCAGATCATGATCGCCATCACCGATTTC
TCCGAAGAGAACGGCGGGACCTTGGTCATCCCGGGCAGCCACAAGTGGGATGACGAACGCATGCCAAAGCAGGAAGAGGC
GATCCCGACCTCGATGGAGGCAGGCGATGCACTGATCTTCATCGGTTCGACGTACCACGGCGGTGGTCAGAACCGGAGCA
ATGCGCCGCGCACGGGGCTGACCATGTCGTATGACCTCGCGATCCTGCGGCAGGAAGAGAACCACTACCTGACGTTGCCC
ATCGAGCGCGTCAAGCGCTTCCCTGAGGAAATGCAGCGGCTGCTCGGGTGGTCGTGCAGCACGACCTATGCAGGATTTGT
CGAGCGCAACGGGGTGATGACCGACCCGCATGCGCTGCTCCAGCAGGACGACTTTGTCGAGGTTGGCCACTTCGACTGA

Protein sequence :
MSVKRFPNSAAPSELASVIEEDGGAIVKGFLSPSLLEHLKKDLLPMLETTPNGVDEYFAGTQTRRLSRLFARTDHMVDVA
LNPLYLETARLILQKPIKLWSGENQVEVAPDIQVGVTQAIQIRPGQGMQPLHRDDSVWLWRHPGYKREARVQIMIAITDF
SEENGGTLVIPGSHKWDDERMPKQEEAIPTSMEAGDALIFIGSTYHGGGQNRSNAPRTGLTMSYDLAILRQEENHYLTLP
IERVKRFPEEMQRLLGWSCSTTYAGFVERNGVMTDPHALLQQDDFVEVGHFD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01512.1 hypothetical protein Not tested PAGI-1 Protein 6e-81 58