Gene Information

Name : Rpic12D_4439 (Rpic12D_4439)
Accession : YP_002984353.1
Strain :
Genome accession: NC_012857
Putative virulence/resistance : Unknown
Product : FAD dependent oxidoreductase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0665
EC number : -
Position : 1077811 - 1079172 bp
Length : 1362 bp
Strand : +
Note : PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_C6399 twin-arginine translocation pathway signal

DNA sequence :
ATGAGTACGAATCTTGAGCGTGGTAAAGAGCGAGCCGACCTGGGGAAGTATCGGGCGCTGGGCGGGTGGGTTGAAAAGCC
CGACGACATGCAGCATGCGCTCGAGGGTAACGTCAGCGCGGATGTGGTGATTGCCGGTGCCGGTTTTGCAGGCCTTTCCG
CGGCGCTGGAGCTCACCAGGCTGGGCGCGAACGTCGTTGTGATTGAGCGGGATTTCGCCGGCTTTGGTGCCAGCGGGCGC
AACGCAGGCTATCTGGCCGGCGCCATGGCGCTCGAATACGATCTCATGTTCAGGGGCCTCAGCAAGGAGCGGGCGACGCA
GATCGTCCGCTACTACGACGACGCTGTCGGCTTCGTGGAAGACAAGCTCAAGGAACACGATATCGACTGCGAGTACGTGC
AGTCCGGGTGGATTCGGGCGGGTGTCCATCCGTCGCAGGAAAAGAAGATCCGCGCCGATATGCTGGTCGGTACCGAACAC
GGCCACAAGTCGGAATTTCTCGATCACGCGCAAATGCGCGCACGCGGGATTCCACCGGCGTTTCTGTTTGGTGAATACAC
GCCGGCCGGAGGAACGCTCCACCCGGGCAAATACGTCATGGGGCTGCGGCGTGCCGCGCTGCGGGCTCGCGTGAAGCTCT
ACGAGAACACGCCGCTGCTGTCTTACACCGAAGGGCCGGTCATTCAGGTGAAGACTCCGCGCGGTAGCGTCAGCGCCCCG
GTGCTGTTGCTGGCCACCAATGCCTACACCCCGCAGCTCGGTTTGCTTGCAAACAAGGTCGTGCCATTGCGGATCTCGGC
AATTGAGACCGAATCGCTGTCCGCAGTGCAGTTGGCCTCGCTGGATTGGCCAAGGCGCGAAGGCATCGTGACGGGCCACT
ACAGCATGGAGAGCTTCCGGCTGACGGCACGTAACACAATCATCTCCACCGTCAAGCGCATCCACTATCCGTACGGATCA
GAAACGCCGAACGTGCCCGCCTACGACCAGTATCGAGCGCTGAGAGCAAACCTCCATGAGCGTTTGCCCACCTTGAAGGA
CGTCGCATTGCGGCATTGCTGGAGCGGCTACATCAGCACCGCCGGCAACGCGCTTCCCGTGGTCGGCACCACCGGCGCAA
ACCAGAACATCTACTACACCGCCGGGTGTTCTGGCCATGGCCTGGCCAGTCAATCCATGCTCGGGAACATGCTCGCCCAG
AAGATTCGCGGGTCCGAGCCGCCGCTGCTGGCAGCGTTGCGCTACGACACGCCCACGCTGCCGCCAGAGCCGTTCCGCTG
GTGTCTCGTCAATGGGGCTCTGGCTGCGGCAAACACATTGGACGATCGATTGAACCGCAAGCTGCGGCACGCGGCAGCCT
GA

Protein sequence :
MSTNLERGKERADLGKYRALGGWVEKPDDMQHALEGNVSADVVIAGAGFAGLSAALELTRLGANVVVIERDFAGFGASGR
NAGYLAGAMALEYDLMFRGLSKERATQIVRYYDDAVGFVEDKLKEHDIDCEYVQSGWIRAGVHPSQEKKIRADMLVGTEH
GHKSEFLDHAQMRARGIPPAFLFGEYTPAGGTLHPGKYVMGLRRAALRARVKLYENTPLLSYTEGPVIQVKTPRGSVSAP
VLLLATNAYTPQLGLLANKVVPLRISAIETESLSAVQLASLDWPRREGIVTGHYSMESFRLTARNTIISTVKRIHYPYGS
ETPNVPAYDQYRALRANLHERLPTLKDVALRHCWSGYISTAGNALPVVGTTGANQNIYYTAGCSGHGLASQSMLGNMLAQ
KIRGSEPPLLAALRYDTPTLPPEPFRWCLVNGALAAANTLDDRLNRKLRHAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01513.1 phytoene dehydrogenase protein Not tested PAGI-1 Protein 7e-118 60