Gene Information

Name : Rpic12D_3786 (Rpic12D_3786)
Accession : YP_002983717.1
Strain :
Genome accession: NC_012857
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 352298 - 353137 bp
Length : 840 bp
Strand : -
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS02110 two-component response regulator transcription regulator protein

DNA sequence : 
GTGGTGGATCGCGTCACGATAAAGGCAAGCGAGCCCTCGCGCAACCGCCTGACGTGCGCTCTGCAGTTCTACAATGCGCC
TCTCCTGCTCTCTTTTTTTTCTGTGATGCGCGTACTGCTCGTAGAAGACGACGACATGATCGGCGACAGCGTGCGCAAGG
GTTTGCGCCACGACGGCTTCACCATCGATTGGGTGCGCGACGGCGAGGCGGCGCTGCACGCCGTCACGGCCCCGGGCGCG
GGTGGCGCGGAAGCGGGCGGCACCCTGTTCGACCTGATGCTGCTCGACCTGGGCCTGCCCAAGCGCGATGGGTTGGAGGT
CGTGCGCGAGTTGCGACAGCGCGGCATCGTCATCCCCATCCTCATTCTGACCGCGCGTGATGCCGTGGCCGACCGTGTGG
CAGGCCTCAATGCGGGTGCGGACGACTATCTCGTCAAGCCGTTCGACCTGCAGGAGCTGGCCGCGCGCATGCATGCGCTG
CTGCGCCGCCAGGGCGGCCGCGCCGATCCGCTCCTGCGCCACGGCGATGTGGTGCTCAACCCCGTCACGCGCGAAGTCTT
GCGCGACGGGGTGCCGGTCAAGCTCTCGGGGCGCGAGTTTGCGGTGCTGCACGCGCTGCTGGCCCGTCCGGGCAAGGTGT
GGTCGATTGCGCAGTTGCAGGACAACCTCTACGGTTGGGATGAGGAGGTCGGCAGCAACACGGTGGAGGTCTATATCCAC
GCGCTGCGCAAGAAGCTCGGCAGCCACCTCATCCAGAACATTCGTGGCGTGGGCTATGTGATTCCGCGCGAGACGTCGGC
GTCGCCTGCGGAACCTGCCAGCGGCGAGGACCACCAATAA

Protein sequence : 
MVDRVTIKASEPSRNRLTCALQFYNAPLLLSFFSVMRVLLVEDDDMIGDSVRKGLRHDGFTIDWVRDGEAALHAVTAPGA
GGAEAGGTLFDLMLLDLGLPKRDGLEVVRELRQRGIVIPILILTARDAVADRVAGLNAGADDYLVKPFDLQELAARMHAL
LRRQGGRADPLLRHGDVVLNPVTREVLRDGVPVKLSGREFAVLHALLARPGKVWSIAQLQDNLYGWDEEVGSNTVEVYIH
ALRKKLGSHLIQNIRGVGYVIPRETSASPAEPASGEDHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-31 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_3786 YP_002983717.1 transcriptional regulator VFG1390 Protein 8e-36 42