Gene Information

Name : Rpic12D_0908 (Rpic12D_0908)
Accession : YP_002980881.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : L-lactate transport
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1620
EC number : -
Position : 952210 - 953886 bp
Length : 1677 bp
Strand : -
Note : TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rso:RSc0981 L-lactate permease transmembrane protein

DNA sequence :
ATGTGGAATCAAGTCTATGACCCGCTCGGCAGCGCCGTGTGGTCGACCATCGCAGCCGGGATACCGGTGGCGGTGCTGCT
ATGCTCGCTGGCGTTCTTCCATATGCAGGCGCATCTGGCCGCCGGCCTGGCGCTGATCGTCGGGGTGGGAATCGCCTCGT
TCGTGTTCGGCATGCCGACCGCGATGGCCAGCAAGGCAGCCGGTCTGGGCATCGTCTCCGGCCTGTTCCCGATTGGCTGG
ATTGTTCTCAACATCATCTTCCTGCACCGGCTCACCACCTTGAACGGGTCGTTCAAGGTGTTACAGAGCTCGATTTCCGG
CATTACCGAAGACCGCCGCCTGCAGCTGCTGCTGGTAGCGTTCAGCTTCGGCGCGTTCTTTGAAGGCGCGGCGGGCTTCG
GCACGCCGGTGGCCGTCACGGGGGCCATCCTGATCGGCCTGGGTTTCTCGCCACTGGCCGCGTCGGGCCTGGCCCTGATC
GCCAACACCGCACCGGTGGCCTACGGCGCGCTGGGTGCCCCGCTCATCGGGCTGGCTTCGGTCACGGGGCTGGACCTGCT
GCAGCTCTCCGCCATGGTTGGCCGCCAGTTGCCGTTCTTCTCGGTGCTGGTGCCGTTCTGGCTGATCTGGGCGTTCGCGG
GCTTCCGCGGCATGCTGCAGATCTGGCCGGCAATCCTGGTGGCGGGCGTGTCGTTTGCGATTCCGCAGTTCCTGGTGTCG
AACTTCCACGGCCCGTGGCTGGTGGACGTGATTGCGGCGCTGGTGTCGATGGGCACGCTCACGCTGTTCCTGAAGGTGTG
GAAGCCCAAGACGATCTGGACCTCGACCGCCCTGCGCAACCGCGAAGACAACTCCCGCGTCGACCCGGAAGCCGCCGCAG
AGGCGCGAGAAGCCACTACGGCCACCAACGGCAAGATCACACGCGTGCAGGCCTGGCTGCCGTGGGTGATCCTGACGGTG
TTCGTCTTCATCTGGGGCGTGCCCCAGTTCAAGGCGTTTGCCGACGGCCTGTGGGCCTACAAGCTCGCCATTCCGGGCCT
CGACAAGATGGTGCTCAAAGGCCCGCCGGTGGTGCCCAAGGTGATTGCCGAAGGTGCGGTGTTCAACTTCAACGTCCTGT
CGATGGCGGGCACGGGCATCCTGTTTTCGGCCATTGTGGGCGGCCTGCTGATGGGCTATTCGCTGCCGCGCATGCTCAAG
GAGTACTGGAACACCATCAAGCTCACGCGCTATTCGCTGCTGACGATCTGCGCGATGTTCGGCATCGGCTACCTGACGCG
CTACTCCGGTCTGGACGCGACGCTGGGCCTCGCCTTCGCCCACACGGGCGTGCTGTACCCGCTGTTCGGCACGATGCTGG
GCTGGCTGGGCGTGGCGCTGACCGGCTCGGATACGGCATCGAACGTGCTGTTCGGCGGCCTGCAGAAGACCACGGCCGAA
CAGCTTGGCCTGTCGCCGATCCTCATGTCTGCGGCAAACAGCTCGGGCGGCGTGATGGGCAAGATGATCGACGCGCAGTC
CATCGTCGTGGCCTCCACGGCCACCAAGTGGTACGGCCACGAGGGCGACATCCTGCGGTATGTGTTCTTCCATTCGCTGG
CGCTGGCCTTCCTGGTGGGGCTGATGATCACCCTGCAGGCCTACGTGGAGCCGTTCACGCGGATGGTGGTGCACTGA

Protein sequence :
MWNQVYDPLGSAVWSTIAAGIPVAVLLCSLAFFHMQAHLAAGLALIVGVGIASFVFGMPTAMASKAAGLGIVSGLFPIGW
IVLNIIFLHRLTTLNGSFKVLQSSISGITEDRRLQLLLVAFSFGAFFEGAAGFGTPVAVTGAILIGLGFSPLAASGLALI
ANTAPVAYGALGAPLIGLASVTGLDLLQLSAMVGRQLPFFSVLVPFWLIWAFAGFRGMLQIWPAILVAGVSFAIPQFLVS
NFHGPWLVDVIAALVSMGTLTLFLKVWKPKTIWTSTALRNREDNSRVDPEAAAEAREATTATNGKITRVQAWLPWVILTV
FVFIWGVPQFKAFADGLWAYKLAIPGLDKMVLKGPPVVPKVIAEGAVFNFNVLSMAGTGILFSAIVGGLLMGYSLPRMLK
EYWNTIKLTRYSLLTICAMFGIGYLTRYSGLDATLGLAFAHTGVLYPLFGTMLGWLGVALTGSDTASNVLFGGLQKTTAE
QLGLSPILMSAANSSGGVMGKMIDAQSIVVASTATKWYGHEGDILRYVFFHSLALAFLVGLMITLQAYVEPFTRMVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glcA CAE85240.1 GlcA protein, putative glycolate permease Not tested PAI V 536 Protein 1e-96 47