|
Name : Rpic12D_0700 (Rpic12D_0700) Accession : YP_002980673.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 732218 - 733729 bp Length : 1512 bp Strand : - Note : TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; KEGG: mms:mma_2905 succinate-semialdehyde dehydrogenase (NADP+) DNA sequence : ATGGCCGAAGCACTCGACTCATCCCGCACAGCCTCCAACGCGCTGGAGCGCATCACGGACCGCACCCTCGTCAAGACGCA GTCCTATGTTGACGGCGCCTGGGTAGGCGCGACAGACGGCGCGACGTTTCCCGTCTACGACCCTGCCACCAACGCACACC TGGCCGACGTCGCCAATCTCGGCCACGCAGAAACGCTGCGCGCGATCGACGCGGCAAATGCGGCGTGGCCCGCGTGGCGC GAGCTGACCGGCAAGGAGCGCGCTGGCCTGATGCGCCGCTGGTTCGAGCTGCTGATCGCCAACGCCGACGACCTCGCCGC GCTGATGACGGCTGAACAAGGCAAGCCGCTGGCCGAAGCCAAGGGCGAAATCGTCTACGGCGCGTCGTTCATCGAATGGT TTGCCGAAGAGGCCAAGCGCGTCTCCGGCGACGTGATGGCCAGCACCTGGCGCGACAAGCGCATGGTCGTGTTGAAGCAG CCGGTCGGTGTGTGCGCATCCATCACGCCGTGGAACTTCCCGCTGGCGATGATCACCCGCAAAGTCGCGCCGGCCATGGC GGCAGGCTGCACCATCGTCATCAAGCCGGCAGAACAGACGCCGCTTTCCGCGCTGGCGATGGCCGAACTGGCGCACCGCG CAGGCATTCCCAAGGGCGTGGTGAACGTGGTGACGGGCGATGCAGACCGCTCGATCGCCATCGGCAAAGCCCTGTGCGAA TCGCCGATCGTGCGGCATCTGTCGTTCACGGGCTCGACCCCGGTCGGTCGCATCCTGATGCAGCAATGTTCGCCGACGGT GAAAAAGGTGGCGTTGGAACTGGGTGGCCATGCGCCGTTCATCGTGTTTGACGACGCCGACATCGATGCCGCCGTGGAAG GCGCAGTGCAGTCGAAATACCGCAACGCCGGCCAGACCTGCGTGTGTACGAACCGTTTCTATGTCCATGCCTCGGTGTAC GACACGTTTGTCGAAAAGCTCTCGGCCAAGGTGCGCGGCATCAAGGTCGGCAACGGTTTCGAATCGGGCGTAGTGCAAGG CCCGCTGATCGACGACCAGGCCGTGGAAAAAGTGCAGCGCCACATCGACGACGCGACGCAGAAAGGCGCACGCCTGACCG CCGGCGGCAAGCTGATGCAGGGCTTCGGCTCGCAGCGTTTTGTCGAGCCCACCGTGCTGGCGGACGCCACGCCCGACATG CTGATTGCGCGCGAAGAGACCTTCGGCCCGGTCTCCGCCATCTTCAAATTCCAGGACGAAGCGGAAGTCGTGCGCCTGGC CAACGACACCGAATTCGGCTTGGCTTCGTACTTCTTCAGCCGCGACATCGGCCGCATCTGGCGCGTGGCCGAGCAGCTCG AATACGGCATGGTTGGCATCAACACGGGGCTGATCTCGAACGAGGTCGCGCCGTTTGGCGGCATCAAGCAGTCGGGCCTC GGCCGTGAAGGTTCGGTCTACGGCATCGACGAGTATCTCGAACTCAAGTATCTGTGCATGGGCGGCATCTGA Protein sequence : MAEALDSSRTASNALERITDRTLVKTQSYVDGAWVGATDGATFPVYDPATNAHLADVANLGHAETLRAIDAANAAWPAWR ELTGKERAGLMRRWFELLIANADDLAALMTAEQGKPLAEAKGEIVYGASFIEWFAEEAKRVSGDVMASTWRDKRMVVLKQ PVGVCASITPWNFPLAMITRKVAPAMAAGCTIVIKPAEQTPLSALAMAELAHRAGIPKGVVNVVTGDADRSIAIGKALCE SPIVRHLSFTGSTPVGRILMQQCSPTVKKVALELGGHAPFIVFDDADIDAAVEGAVQSKYRNAGQTCVCTNRFYVHASVY DTFVEKLSAKVRGIKVGNGFESGVVQGPLIDDQAVEKVQRHIDDATQKGARLTAGGKLMQGFGSQRFVEPTVLADATPDM LIAREETFGPVSAIFKFQDEAEVVRLANDTEFGLASYFFSRDIGRIWRVAEQLEYGMVGINTGLISNEVAPFGGIKQSGL GREGSVYGIDEYLELKYLCMGGI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-131 | 62 |
