Gene Information

Name : Rpic12D_0007 (Rpic12D_0007)
Accession : YP_002979991.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 9627 - 10877 bp
Length : 1251 bp
Strand : -
Note : PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein

DNA sequence :
ATGCCACGCAAACCGAGAGCCAAGCCGGCCGACCTGCCGGCGATCCCTGCCGAACTGCTTGAGCAGTTCGGCAGCGGCCC
GATGACGGCCGAAGCCATCAACGCGGCGACCCTGGCCCTCAAGAAGGCCCTGATCGAACGGGCGCTGGGCGGCGAGATGA
ATCACCATCTGGGCTACCCGCCAGGTGCGTCCAAGCCGGCCACGGTGAGCAATCAGCGCAACGGCACGGGCGCCAAGACG
GTGCTGACCGAGGGCGGCCCGATCCGCATCGAGGTACCGCGCGACCGTGACGGCAGCTTCGCGCCGCTGCTCATCCCTAA
ACACGAACGACGCTTCAAGGGCTTCGACGACAAGATCGTCGCCATGTACGCCCGGGGCATGACCGTGCGCGAGATCCAGG
GCTTCCTGCTGGAGCAATATGCGACGGACGTCTCGCCTGAGTTCATCAGCTCGGTCACCGACGAGGTGATGGCCGAAGTC
ACCGCCTGGCAGGCTCGGCCGCTCGATCCCATGTACCCGGTGGTGTTCTTCGACGCGCTGCGGGTCAAGATCCGGGAGGA
TGCCGTGGTGCGCAACAAGGCCGTCTATCTGGCGCTGGGGGTTCTGCCCGACGGCACGCGTGACATCCTGGGCCTGTGGA
TCGAGAACACCGAGGGTGCCAAGTTCTGGATGAAGGTGTTCAACGATCTCAAGACGCGCGGCGTGAACGACATCCTGATC
GCCGTGACCGACGGCCTCAAGGGCATGCCCGAGGCGCTGGCAGCTGTGTTCCCCGCGACCACGCTGCAGACCTGCATCGT
CCACCTGATCCGCAACAGCCTGGATTACGCGAGCTGGAAGGACCGCCGTGAGTTGGCTGCAGCGATTCGACCGATCTACA
CCGCACCGAGCGCAGAGGCCGCGCAGGCCGAGCTTGAGGCGTTTGCCGACGGCCCGTGGGGGCAGCGATACCCCACCGTC
AGTGCCGCCTGGCGCAACGCCTGGGATCGCGTGATTCCGTTCTTTGCGTTTCCGCCGGCGGTACGCAAGGTGATCTACAC
GACGAACGCCATCGAGAACATCAACGCCCAACTACGCAAGATCATCAAGACCCGTGGCCACTTCCCGAGCGACGAGGCCG
CGACCAAGCTCATCTGGCTGGCACTGCGCAACATCACGGCGGGTTGGAGCCGTGCCGCTCACGACTGGAAGCAGGCGATG
AACCAGTTCGCTATCCTCTACGCGGATCGATTCGTTCGACCGTCCGTGTGA

Protein sequence :
MPRKPRAKPADLPAIPAELLEQFGSGPMTAEAINAATLALKKALIERALGGEMNHHLGYPPGASKPATVSNQRNGTGAKT
VLTEGGPIRIEVPRDRDGSFAPLLIPKHERRFKGFDDKIVAMYARGMTVREIQGFLLEQYATDVSPEFISSVTDEVMAEV
TAWQARPLDPMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRELAAAIRPIYTAPSAEAAQAELEAFADGPWGQRYPTV
SAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRKIIKTRGHFPSDEAATKLIWLALRNITAGWSRAAHDWKQAM
NQFAILYADRFVRPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 4e-85 46
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 2e-82 44
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 3e-92 44
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 8e-81 44
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 7e-80 43