Gene Information

Name : Rpic12D_0688 (Rpic12D_0688)
Accession : YP_002980661.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 719224 - 720627 bp
Length : 1404 bp
Strand : +
Note : KEGG: eba:ebA2397 hypothetical protein

DNA sequence :
ATGAAAGCGTCCCTTTCCCGTTTCGCACAGCGCGCCAGGCCCTACGCGCTCAGCATCGCGCTCGCCTGCGCCGTCACGGC
CGCAGCCGGCGTCGCCTGGGCGCAGACCCGCATCGGCCCCACCGGCGTCGGCGTGAGCGGCAGCGTCATCGGCGACGACG
TGCTCTACAGCATCGGCGGCGGCCGGGCCGTGTCCATGGGCGGCGCCGGGAACATGCAGAGCATCGGCGTGGGCATCGGC
TGGAACAGCAACCTGATCTGCGGAAACATGAGCATCACGACGACGCTGCAGAACCAGTTGAACGGCCTCACCAATGGCTT
TCAGCAGATCATGTCCTCGGTGATCCAGAGCGCCACCAGCGCCGTGGCGTCGCTGCCGGCCCTGATCATCCAGCGTGCCG
ATCCGGGCCTCTACAACCTGCTGACCAACGGCGTGCTGCAGGCGCGGCTCGATTTCGACCGCAGCAAATTGACGTGCAAG
GCGATGGCCAACCGGATGGCGGACATGGCCGGCGGCCAGGCCGGGTGGGATCAGCTCGCCGAAGGTTTCGCGCTGCGCGA
TGCGGTGAGCAGCACCGATGCGGTGTCCGCCGTCGAGCAGGCCGAATCGAACAAGGGCAACAACGGCGTGCCCTGGGTGG
GCGGCGGCAACGCGGGCGGCTCGGGCCAGGGTTCCATCAAGGTGGTCGGTGATGTGACCCGTGCCGGCTACAACCTGCTC
AACAGTCGCGGTGTCAGCGACACCTCATCCATCCCGCGCGCGTCCTGCGGCAACCGGCTGACCTGCCAAACCTGGTCCTC
GCCGCAGGCCGCAGCGGACTTCGCGACCCGCGTGCTCGGCGAGCGCGAGCAACGCACCTGCGAGACCTGCACCAAGACGC
AGACGACGCCTGGCGTCGGCCTGACGCCGGTGATCCAGGAAGAGTACGAGACCAAGCTGCAGGCGCTGCAGGAGCTGGTG
ACGGGCGCGAAGCCGACGACGGTGGCGAACCTCGAAGCCGCCGGCAGCAACTCGCTGCCGATCACGCGCGGCGTGATCGA
GGCGCTGCGCGACGAACCCGATCAAGACCTGCTCGGCAAGCGCCTGGCGTCCGAAGCCGCGCTGTCGAGCGTGCTGGAGA
AGGCCCTGCTGTTGCAGCGCACGCTGCTGACCGGCAAGAAGGAGCCCAACGTCGCCGCCAACGAGCTGGCCGTGAAGGCC
GTCGATCAAGAGAACACCGCGCTGGAGCAGGAGATCAACAACCTCAAGACCGAGCTGGAGCTGCGGCGCACGCTGGCCGG
CAATTCGGCGATGGCGATCGTGCAGCGCCACGGCACCCGCGCCGCGGGCTCGCGCGGCATCTTCGAGGGCGACACGACGC
GCGACCGCCTCAAGGAAGTGCAGAAGCCGCGGAGCGGGCCATGA

Protein sequence :
MKASLSRFAQRARPYALSIALACAVTAAAGVAWAQTRIGPTGVGVSGSVIGDDVLYSIGGGRAVSMGGAGNMQSIGVGIG
WNSNLICGNMSITTTLQNQLNGLTNGFQQIMSSVIQSATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLTCK
AMANRMADMAGGQAGWDQLAEGFALRDAVSSTDAVSAVEQAESNKGNNGVPWVGGGNAGGSGQGSIKVVGDVTRAGYNLL
NSRGVSDTSSIPRASCGNRLTCQTWSSPQAAADFATRVLGEREQRTCETCTKTQTTPGVGLTPVIQEEYETKLQALQELV
TGAKPTTVANLEAAGSNSLPITRGVIEALRDEPDQDLLGKRLASEAALSSVLEKALLLQRTLLTGKKEPNVAANELAVKA
VDQENTALEQEINNLKTELELRRTLAGNSAMAIVQRHGTRAAGSRGIFEGDTTRDRLKEVQKPRSGP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-116 78
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 3e-117 75
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 5e-107 67
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 7e-100 66
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 1e-101 65
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-101 65
YpsIP31758_3700 YP_001402654.1 hypothetical protein Not tested YAPI Protein 1e-48 41