Gene Information

Name : Rpic12D_0687 (Rpic12D_0687)
Accession : YP_002980660.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 718264 - 719214 bp
Length : 951 bp
Strand : +
Note : PFAM: protein of unknown function DUF1527; KEGG: eba:ebA2511 hypothetical protein

DNA sequence :
ATGAACCGCCTGCTGTCGGCGTCGTCGCGCCGGGCCCGCCTTGCCATCGCCTCGGTGCTGCTCGGCGGCGCCGCTTCGAC
GTTCGCGCTGAACACGGCCACCATCGTGTCCTCGGCCCTGTCGCCCGACTGCCTGGAGTACCGCGTGGTCGGCATCTGCT
ACTGGTTGTTCTGCACCTGGACGGGCTGCACGGTGCGCACCTCGGTGAAGGTGCGCCACTACGTGCCCGACGCCGTGGTA
TCGAGCTACAGCAACACCGGCGAGAACCCGTGGATCGAGGTGCGCGCCATGAGCATGCCCAACCCCACGGCGCAGGCCGG
CGGCGACGGGACGACGAACCACGACAACGAGAACAACCTGGCGAAGTTCAAGAACGCCGACGTGATCGGGCATCCCGGTG
GCTCGGTATTCAGCCAGTTCGCCAGCGCCTCCGGCTACGCCTGCCAGGGCGCAGGCACGGCCTTCATGCCGTACCTGCTG
AGCACCCTCGACACGCTGGCCTGGCGCTACAACGTGCCGGAGATGGTGTACCCCGAGGCGCTGATCCCCGGCATGCGCGA
GATCGGCGGCCGCACGACGCTCAACCTGTGGGGCAACGTCTATCCGCGCGGCGGCTTCCTGCACCAGACCGACGACTACA
AGAGCGGCGCCGTCGTCGCGCAGCGCGCGGGCGATGTCGTCACGCGGCGCATGCAGCCGCACGTCTACCAGCCGCTGCTC
GCGAGTTCGAGCGACGGCTACTGGCCGGCCGGCGCCCTGATGGAGAGCGATGCCTCCACGGGCAAGTGGCAGGAGCTGAC
GCCGACCCTCTCCAACTCCTGCGCTGTGTTCCCGCACAGCAATACGCGCGTGCAGGCCCAGCAAGGCGACTACGCCTGGG
CGCTGTGGCGGCCCTATGCCTGCTGCCAGCGCCGCGGGCAGGTCTTCCTCGGCAGCGTCGATTTCCTCTGA

Protein sequence :
MNRLLSASSRRARLAIASVLLGGAASTFALNTATIVSSALSPDCLEYRVVGICYWLFCTWTGCTVRTSVKVRHYVPDAVV
SSYSNTGENPWIEVRAMSMPNPTAQAGGDGTTNHDNENNLAKFKNADVIGHPGGSVFSQFASASGYACQGAGTAFMPYLL
STLDTLAWRYNVPEMVYPEALIPGMREIGGRTTLNLWGNVYPRGGFLHQTDDYKSGAVVAQRAGDVVTRRMQPHVYQPLL
ASSSDGYWPAGALMESDASTGKWQELTPTLSNSCAVFPHSNTRVQAQQGDYAWALWRPYACCQRRGQVFLGSVDFL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-121 87
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-116 82
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 1e-105 74
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 4e-98 69
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-98 69
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-96 68
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 8e-76 51
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 8e-76 51
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-68 51
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 8e-67 50
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 5e-72 49
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 5e-66 49
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 4e-72 48
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-58 47