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Name : Rpic12D_0683 (Rpic12D_0683) Accession : YP_002980656.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 713332 - 716214 bp Length : 2883 bp Strand : + Note : KEGG: ajs:Ajs_2186 hypothetical protein DNA sequence : ATGGCCTGGTCGTTGCCCTGGGCACGCAAGGTCGCCACGCCTGCCGGCCCCAGCCTGGAGGCCGATGACGCCTGGTCGCA GCATGTCTCGACGCTGGCCGCGCACGGTGTTCCCGAGCCCGGCAGCGCGGTGGGCGGCCAGCCGCGCCGGCCGGCCACCG AGGCGGACCTGCAGGCACTCTACGGCGTGGCGCCGTCCTTCGCCGACCTGCTCCCCTGGGTGGAGTATCTGCCCGACTCC AAGAGCGTGCTGCTGGAAGACGGCCAGTCGGTGGCGGCCTTCTTCGAGCTGGCGCCGGTCGGCACCGAGGGCCGCGAGAT GGCCTGGCTGTGGCAGGCGCGCGATGCGTTGGAGAACGCGCTGCAGGACTCGTTCGACGAACTCGACGAGAACCCCTGGG TGGTGCAGCTCTACGCCCAGGACGAAGCAACCTGGGACAACTACCTGCGCGGGCTCACGAACTACGTGCGGCCGCGCGCG CAAGGCAGCGCCTTCACGGACTTCTACCTGCGCTTCTTCGGGCATCACCTGCGCGCCATCGCCAAGCCCGGCGGCCTGTT CGAGGACACGACGGTGACGCGCCTGCCGTGGCGCGGCCAGGTGCGGCGCGTGCGCATGGTGGTCTACCGGCGCGCGAGTG CGTCTGGCGCGTCCCGGCGCGGCCAGTCGCCCGAGCAGGCGCTGACGACGATCTGCGACCGGCTCGCAGGTGGCCTCGCC AATGCGGGCGTGAAGGCCCGGCGCATGGAGGCGCACGACATCCACGACTGGCTGCTGCGCTGGTTCAATCCGCACCCCAC CATGCTTGGCCCTGCCGCCGACGACCGCGAGTGCTTCTACGCGCTGACCCGCTACCCCGAGGAAGCCGAGCAAGGCGAGA TCGAGCTGGCCAGCGGGGACTTCGCGCAGCGCCTGTTCTTCGGCCAGCCGCGCTCGGACGTGGCGAACGGCACCTGGGTG TTCGACGGCATGCCGCACCGGGTCATCGTGATGGACCGGCTGCGCATGCCGCCCGCCACGGGCCACGTCACTGGCGAGAC GCGCAAGGGCGGCGATGCGGTCAACGCGCTGTTCGACCAGATGCCCGAGGACACGGTGATGTGCCTGACGGTCGTGGCGA CGCCGCAGGACGTGCTCGAAGCGCACCTGAACCACCTGAGCAAGAAGTCGGTCGGCGAGACGCTGGCCTCGGAGCAGACG CGCCGCGACGTGCAGGAAGCGCGCGGCCTGATCGGCAGCGCGCACAAGCTGTACCGCGGCGCGCTGGCCTTCTACCTGCG CGGGCGCGACCTCGCGCAGCTCGACGCCCGCGGCCTGCAACTGGTCAACGTCATGCTCAACGCGGGCCTGCAGCCGGTGC GCGAGGAAGACGAAGTGGCGCCGCTCAACAGCTACCTGCGCTGGCTGCCGTGCGTGTTCGATCCGGCCGCCGACAAGCGC CAGTGGTACACGCAACTGATGTTCGCGCAGCACGCGGCGAACCTCGCGCCCGTGTGGGGCCGCAGCCAGGGAACCGGCAA TCCGGGCATCACGTTCTTCAACCGCGGCGGCGGGCCGATCACCTTCGACCCGCTGAACCGGCTCGACCGGCAGATGAACG CCCACCTGTTCCTGTTCGGCCCCACCGGCTCGGGCAAGAGCGCCACGCTCAACAACATCCTGAACCAGGTGACGGCGATC TACCGGCCGCGCCTGTTCATCGTGGAGGCGGGCAACAGCTTCGGCTTGTTCGGCGACTTCGCGGCGCGGCTGGGCATGAA GGTACATCGCATCAAGCTCGCGCCCGGCGCCGGGGTAAGCCTCGCTCCGTTCGCCGACGCCCACCGGTTGGTCGAAACGC CCAGCCAGGTGCAGACGCTGGATGCCGACGCCCTGGACGAGGATCGCGACGAGGCGGCACAGGCAGCGGATGCCGACGAG CAGCGTGACGTGCTGGGCGAACTGGAGATCACCGCGCGGCTGATGATTACCGGCGGCGAGGACAAGGAAGAGGCGCGCAT GACGCGCGCCGACCGCAGCCTGATCCGCCAGTGCATCCTAGATGCGGCTCAGCGTTGCGTGGCCGACCAGCGCACCGTCC TCACGCGCGACGTGCGCGATGCGCTGCGCGAGCGCGCCCGCGACACGGCACTGCCCGAGGTGCGGCGCGCGCGGCTGCTG GAAATGGCCGACGCGATGGATATGTTCTGCCAGGGCGTGGACGGCGAGATGTTCGACCGGCCCGGCACGCCCTGGCCCGA GGCCGACATCACCATCGTCGATCTGGCGACCTTCGCACGCGAGGGCTACAACGCGCAGCTTTCCATCGCCTACATCAGCC TCATCAACACGGTCAACAACATCGCCGAGCGCGACCAGTTCCTCGGCCGCCCGATCATCAACGTGACGGACGAGGGGCAC ATCATCACCAAGAACCCGCTGCTCGCGCCCTACGTCGTGAAGATCACGAAGATGTGGCGCAAGCTCGGCGCCTGGTATTG GCTGGCGACGCAGAACATCGACGACCTGCCCAAGGCCGCCGAGCCCATGCTCAACATGATCGAGTGGTGGATCTGCCTCT CGATGCCACCGGACGAAGTGGAGAAGATCGCGCGCTTCCGCGAGCTGAACGCGGCGCAGAAGGCGCTGATGCTGTCGGCC CGCAAGGAGGCCGGCAAGTTCAGCGAGGGCGTGATCCTTTCCAAGAGCATGGAAGTGCTGTTCCGTGCGGTGCCGCCCAG CCTGTACCTGGCGCTGGCTCAGACCGAGCCGGAAGAGAAGGCCGAGCGTTTCCAGTTGATGCAGCAGTACGGCATCGGCG AACTGGATGCCGCTTTCAAGATCGCCGAGAAGATCGACCGCGCCCGCAGCATCGAGCCGCTGGCGCTCGATGCGCTGGCG TGA Protein sequence : MAWSLPWARKVATPAGPSLEADDAWSQHVSTLAAHGVPEPGSAVGGQPRRPATEADLQALYGVAPSFADLLPWVEYLPDS KSVLLEDGQSVAAFFELAPVGTEGREMAWLWQARDALENALQDSFDELDENPWVVQLYAQDEATWDNYLRGLTNYVRPRA QGSAFTDFYLRFFGHHLRAIAKPGGLFEDTTVTRLPWRGQVRRVRMVVYRRASASGASRRGQSPEQALTTICDRLAGGLA NAGVKARRMEAHDIHDWLLRWFNPHPTMLGPAADDRECFYALTRYPEEAEQGEIELASGDFAQRLFFGQPRSDVANGTWV FDGMPHRVIVMDRLRMPPATGHVTGETRKGGDAVNALFDQMPEDTVMCLTVVATPQDVLEAHLNHLSKKSVGETLASEQT RRDVQEARGLIGSAHKLYRGALAFYLRGRDLAQLDARGLQLVNVMLNAGLQPVREEDEVAPLNSYLRWLPCVFDPAADKR QWYTQLMFAQHAANLAPVWGRSQGTGNPGITFFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNILNQVTAI YRPRLFIVEAGNSFGLFGDFAARLGMKVHRIKLAPGAGVSLAPFADAHRLVETPSQVQTLDADALDEDRDEAAQAADADE QRDVLGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAQRCVADQRTVLTRDVRDALRERARDTALPEVRRARLL EMADAMDMFCQGVDGEMFDRPGTPWPEADITIVDLATFAREGYNAQLSIAYISLINTVNNIAERDQFLGRPIINVTDEGH IITKNPLLAPYVVKITKMWRKLGAWYWLATQNIDDLPKAAEPMLNMIEWWICLSMPPDEVEKIARFRELNAAQKALMLSA RKEAGKFSEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERFQLMQQYGIGELDAAFKIAEKIDRARSIEPLALDALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 83 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 81 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 67 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 63 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 63 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 63 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 52 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 51 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 50 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 50 |
