Gene Information

Name : Rpic12D_0682 (Rpic12D_0682)
Accession : YP_002980655.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 712898 - 713332 bp
Length : 435 bp
Strand : +
Note : KEGG: eba:ebA2407 hypothetical protein

DNA sequence :
ATGCGTCGGATTTGGATTGAATCGGCCGCGGCCCTGTGCGCGGTCATGGTGCTGGGCGGCTGCGCCACCAGCAAGGACGA
GCTGCTGCCGCACGGCGATCACACCATGCTCGACGTGTGGAACCAGGAGACGGGCGGCAGCGCCGGTGGCGGACAAGCCG
CCCGGCAACTGCTCGATGCGCGCCAGGGCCTGCGCCGGCCGCTGACCGAGGCCGACGTGCAGGCGGCGCCCGCCGCCGCT
GCCGCCTACACGCGCACCGCGGCCAACGAGATTTACCGCCAGTTCCACCGGCTGCCGAACCCGGACCTGGTGATGTACGT
GTTCCCGCACCTGGCCGGCACCGACCCGGTTCCCGTGCCCGGCTACACCACCGTGTTCCCGCTCTACCAGCGCGTGCAGT
ACGCGATGCCTGGCGAGCGCCTGGAGGACTACTGA

Protein sequence :
MRRIWIESAAALCAVMVLGGCATSKDELLPHGDHTMLDVWNQETGGSAGGGQAARQLLDARQGLRRPLTEADVQAAPAAA
AAYTRTAANEIYRQFHRLPNPDLVMYVFPHLAGTDPVPVPGYTTVFPLYQRVQYAMPGERLEDY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C48 AAN62142.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-33 75
ORF SG58 AAN62280.1 hypothetical protein Not tested PAGI-3(SG) Protein 5e-36 73
pph83 CAI36124.1 signal recognition particle GTPase Not tested PPHGI-1 Protein 6e-34 66
unnamed ABR13363.1 hypothetical protein Not tested PAGI-5 Protein 6e-28 65
EXA34 ABD94643.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-33 60
RL023 AAP84150.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-33 57
PMI2577 YP_002152296.1 lipoprotein Not tested Not named Protein 1e-23 52
t4267 NP_807866.1 lipoprotein Not tested SPI-7 Protein 3e-23 47
STY4571 NP_458656.1 putative lipoprotein Not tested SPI-7 Protein 3e-23 47
YE3483 YP_001007642.1 putative lipoprotein Not tested YAPI Protein 8e-20 46
YpsIP31758_3706 YP_001402660.1 lipoprotein Not tested YAPI Protein 2e-21 45
api38 CAF28512.1 putative lipoprotein Not tested YAPI Protein 5e-22 45