Gene Information

Name : Rpic12D_0680 (Rpic12D_0680)
Accession : YP_002980653.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 710541 - 711458 bp
Length : 918 bp
Strand : +
Note : KEGG: eba:ebA2409 hypothetical protein

DNA sequence :
ATGAAGCGCTGCTTCCTTCCGGCCCTGGCCGGTGTTCTGTTTTGCCTGGGTTTCGTGCCCGCGGGCCATGCCGTTGAAAT
CCTGCGCTGGGAGCGCCTGCCGCTGGCCGTGCCGCTGGTGGTCGGCCAGGAGCGCGTGGTATTCATCGAGCGCAACGTGC
GCATCGGCGTGCCGGCCGGCGTCGGCGAGCAGTTGCGCGTGCAGAGCACGGGCGGAGCGATCTACCTGCGCGCCAGCGCG
CCCGTCCCGCCCACGCGGCTGCAACTACAGGACGTGGAATCCGGCGCGCTGATCCTGCTGGACATCGCCGCCGAGCCGGC
CAAGGCGGGCCAGCCTGCGCTCGAACCCGTGCGCATCGTCGATGGCGATGTGCCGGCCACCCGCTACGGCGAGCCGGCCA
GCCCCTCGGCCACCGCGGACGACGATGCGCAGCGCCCGACACCAGCCGCCCGCCGCGCAACGCCGGTGGCCGTGGTGCTG
ACGCGCTACGCGGCGCAGAACCTGTACGCGCCGCTGCGCACCGTGGAGCCCATGGCCGGCATCGGCCGCGTCAACCTGCG
TCGCAACCTCGCGCTGGACACCTTGCTGCCCACGCTGCCGGTGCGCGCGCAGGCGCTGGCCGTATGGCGGCTCGAAGACC
AGTGGGTGACGGCCGTGAAGCTCACCAACACCTCCGGACGCTGGCTCGACCTCGATCCGCGTGCGCTGCAGGGCGACTTC
CTCGCCGCGACCTTCCAGCACCCGACCCTGGGGCCGGCCGGCCGCGCGGCCGACACCACCGTGGTCTATCTCGTCACCCG
TGGCCACGGCCTGGCCGAGTCGCTGCTGCCCAAGGTGGCGCCGATCGACGCGACGGTAAACCTGCCGCCGGCGGCGGCCG
GCCAGGCCGAAGGAGGAGGAGCGCGCGATGAAAAGTAA

Protein sequence :
MKRCFLPALAGVLFCLGFVPAGHAVEILRWERLPLAVPLVVGQERVVFIERNVRIGVPAGVGEQLRVQSTGGAIYLRASA
PVPPTRLQLQDVESGALILLDIAAEPAKAGQPALEPVRIVDGDVPATRYGEPASPSATADDDAQRPTPAARRATPVAVVL
TRYAAQNLYAPLRTVEPMAGIGRVNLRRNLALDTLLPTLPVRAQALAVWRLEDQWVTAVKLTNTSGRWLDLDPRALQGDF
LAATFQHPTLGPAGRAADTTVVYLVTRGHGLAESLLPKVAPIDATVNLPPAAAGQAEGGGARDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 5e-82 69
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-71 66
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 2e-67 59
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-67 59
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-68 59
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 5e-67 54
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 7e-46 48
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 7e-46 48
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 5e-43 48
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 5e-43 48
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 1e-48 47
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 1e-45 47
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-44 42