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Name : Rpic12D_0667 (Rpic12D_0667) Accession : YP_002980640.1 Strain : Genome accession: NC_012856 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 699835 - 702117 bp Length : 2283 bp Strand : + Note : SMART: DEAD-like helicases; KEGG: mpt:Mpe_A2368 plasmid-related protein DNA sequence : ATGTCCCTCGATACCGACGTTGTTCCCGCCGCCGAAGGCACGCCCATCCAGGGCGACCTGCTCGAAGCGGCTGCTTCTTC CCTGGCGATGAGCCTCCAGGATTTCGTTGCCGAATTCGGCGACGAGCTGCTGGATTCGCTCAACCGCGCCAATCCACCCG TCTACACCGGCCAGGCCCGGCCGCACCGCCAGATCGTGCTGGCCAGTCTCAAGCGCAAGCTGTTCCAGGCGCAGGCCGAG GTGGTGCATGCCGTCATCGAACTGCTGGCCGACCGTGGCGAACGCGCCGCGATCGTCAATGGCGAGATGGGCTGCGGCAA GACGACCGTCGGTATCGCCACGGCCGCCGTGCTGCACGCCGAAGGCTACCGCCGCACTCTGGTGCTGTCGCCGCCCCACC TGGTCTACAAGTGGCGCCGCGAAATCCAGGAGACGGTGGCCGGTGCCAAGGTCTGGGTGCTCAATGGCCCGGACACGCTG GTCAAGCTCATCAAGCTGCGCGAGCAGTTGGGCGTGCCGGCGCGCGGCCAGGAGTTCTTCGTGCTCGGGCGCGTGCGGAT GCGCATGGGTTTCCACTGGAAGCCCGTCTTCAACGTGCGGCGCACGCGGCACGGCGAAGTAGGCGCATGCCCGGACTGCG GCCAGATCATCACCAACCTCGACGGCGAGCCGATCAACCCGGTCGAACTCGAAGCCGAGGACTACCGCCGCCGGTGCAGC CATTGCGCCGCACCGCTGTGGACGCTGATGCGACCGAGGAGCCTGTCCGCCAGCGACCAGTCCACGGCCGTCTTCAAAGC CTTGCAGCGCATCCCGACCATCGGGGAAGTCACCGCGCAGAAGCTGATGCGCAAGTTCGGCGACTCCTTCCTGGCGTCCA TGCTCGGCGACAACATCCACGAGTTCATCAACCTCATGGATGGGAACGGCGAGCTGGTCTTCTCGGATCGTCAAGCGCAC CGCATGGAGCGGGCGATGGCGAACATGGAGTTCGGCTTCGGCGAGGGAGGCTACCAGCCGTCCGAGTTCATCAAGCGCTA CCTGCCGCAAGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGCGGCAGCGCCCAGGGCCAGG CCATGGGCGTGTTGGCGGCCAAGGCACGCAAGACGCTGCTGCTCACCGGCACGCTGATGGGCGGCTACGGCGACGACCTT TTCCACCTGCTGTTCCGAGCCCTGCCGGGGCGAATGATCGAAGATGGCTACCGCCCGACCAAGAGCGGCAGCATGACCTC GGCCGCGATGGCGTTCATGCGCGATCACGGCGTCCTCAAGGACATCTATTCCGAGAGCACCGGCACGGCGCACAAGACGG CCAAGGGCAACAAGGTCTCGGTGCGCACGGTCAAGGCGCCGGGCTTCGGCCCGAAGGGCGTGCTGCGTTGCGTGCTGCCG TTCACGGTCTTCCTCAAGTTGAAGGACATCGGCGGCAATGTGCTGCCGCCCTACGACGAGGAGTTCCGCGAGGTGGCGAT GGACACGGCGCAAGCCGCGGCCTATCGCGATCTGTCGGGTCGGCTGACCACAGCGCTGAAACAGGCGCTGGCGAAGCGCG ACACGACGCTGCTCGGCGTGGTCCTCAACGTGCTGCTGGCCTGGCCGGATTGCTGCTTCCGGTCGGAGACGGTGGTGCAC CCGCGCACGCGCCAGACCTTGGCCTTCGTTCCGGCTCAGTTCAACGAGCTGGAGGTGATGCCCAAGGAGCGCGAGCTGAT CGAGATCTGCAAGCAGGAGAAGGCTGCGGGTCGCAAGACGCTGGTCTATTCGGTCTACACCGGCACGCGCGACACCACGT CGCGCCTGAAGGTGCTGCTGGAGCAGGAAGGCTTCAAGGTGGCAGTGCTGCGCGCAAGCGTGGATGCCTCCCGCCGCGAG GACTGGATCGCCGAGCAGTTGGATCGCGGCATCGACGTGCTCATCACCAACCCGGAGTTGGTCAAGACCGGGCTGGACTT GTTGGAGTTTCCGACGATCGTGTTCATGCAGTCGGGCTACAACGTCTATAGCCTGCAGCAGGCGGCCCGGCGCTCGTGGC GCATCGGCCAGAAGCAGCCGGTTCGCGTGATCTACCTCGGCTACGCGGCTTCCTCGCAGATGACCTGCCTGGGGCTGATG GCCCGAAAGATCATGGTCTCGCAAAGCACGTCGGGAGACGTGCCCGAATCGGGACTGGATGTGCTGAACCAGGACGGTGA TTCCGTCGAGGTGGCACTGGCCCGGCAGCTCGTCGCGGCCTGA Protein sequence : MSLDTDVVPAAEGTPIQGDLLEAAASSLAMSLQDFVAEFGDELLDSLNRANPPVYTGQARPHRQIVLASLKRKLFQAQAE VVHAVIELLADRGERAAIVNGEMGCGKTTVGIATAAVLHAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTL VKLIKLREQLGVPARGQEFFVLGRVRMRMGFHWKPVFNVRRTRHGEVGACPDCGQIITNLDGEPINPVELEAEDYRRRCS HCAAPLWTLMRPRSLSASDQSTAVFKALQRIPTIGEVTAQKLMRKFGDSFLASMLGDNIHEFINLMDGNGELVFSDRQAH RMERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDL FHLLFRALPGRMIEDGYRPTKSGSMTSAAMAFMRDHGVLKDIYSESTGTAHKTAKGNKVSVRTVKAPGFGPKGVLRCVLP FTVFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLSGRLTTALKQALAKRDTTLLGVVLNVLLAWPDCCFRSETVVH PRTRQTLAFVPAQFNELEVMPKERELIEICKQEKAAGRKTLVYSVYTGTRDTTSRLKVLLEQEGFKVAVLRASVDASRRE DWIAEQLDRGIDVLITNPELVKTGLDLLEFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAASSQMTCLGLM ARKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 91 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 90 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 71 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 71 |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 70 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 2e-178 | 52 |
