Gene Information

Name : Rpic12D_0664 (Rpic12D_0664)
Accession : YP_002980637.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 696725 - 697552 bp
Length : 828 bp
Strand : +
Note : PFAM: protein of unknown function DUF932; KEGG: bpt:Bpet1317 hypothetical protein

DNA sequence :
ATGCAACTTGCATCCCGCTTCGCTCATCGCTCCCCGGTGCTGCGCTCAAGTCACCCGCTGTCGGATGATCAGATTCGCAC
CGTGGCCCCCTCCATCTTCGCGGACACCCCGCACGAAAGCCGCTCCGAACGGTACAGCTACATCCCCACGGCGGCTGTGC
TGACCGAACTGCGCAAGGAAGGATTCCAGCCGTTCATGGTGTGCCAGACCCGCGTGCGACACGAGGATCGCCGCGACTAC
ACCAAGCACATGCTGCGCCTTCGCCACGCAAGCCAGATCAACGGCGCCGAGGCGAATGAAATCATCCTGCTCAATTCGCA
CGATGGCACCAGCAGCTACCAGATGCTGGCGGGCATGTTCCGCTTCGTCTGCCAGAACGGGCTGGTGTGCGGCGACACGT
TCGCCGACGTGCGCGTACCTCACAAGGGCAACGTCACCGATCACGTGATCGAAGGCGCCTACGAGGTGCTGCATGGCTTC
GAGCGCGTGCAGGACTCGCGCGACGCCATGCGTGTCATCACGCTCGACGACGGCGAGGCCGAAGTCTTCGCCAGATCGGC
GCTGACCCTCAAGTACGACGATTCGGGCAAGGCCCTGCCCATCACGGAGACCCAGATCCTGCGGCCCCGTCGCTTCGACG
ACAACCGCGCCGATCTGTGGTCAGTCTTCAACCGAGTGCAGGAGAACCTGGTCAAAGGCGGCCTGGCCGGCCGTGCCGCC
AACGGGCGCCAGCAACGCACGCGCCCCGTTCAAGGCATCGACCAGAATGTCCGGCTCAACCGGGCACTCTGGCTGCTCTC
GGATGGCCTGCGTCAGCTCAAAGCCTGA

Protein sequence :
MQLASRFAHRSPVLRSSHPLSDDQIRTVAPSIFADTPHESRSERYSYIPTAAVLTELRKEGFQPFMVCQTRVRHEDRRDY
TKHMLRLRHASQINGAEANEIILLNSHDGTSSYQMLAGMFRFVCQNGLVCGDTFADVRVPHKGNVTDHVIEGAYEVLHGF
ERVQDSRDAMRVITLDDGEAEVFARSALTLKYDDSGKALPITETQILRPRRFDDNRADLWSVFNRVQENLVKGGLAGRAA
NGRQQRTRPVQGIDQNVRLNRALWLLSDGLRQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 1e-113 82
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-111 79
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 1e-74 55
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 5e-73 54
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 3e-73 54
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-73 54
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-73 54
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 1e-73 54
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 4e-73 53
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 6e-73 53
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 4e-73 53
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 6e-73 53
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 4e-73 53
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 4e-73 53
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 4e-73 53
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 1e-75 53
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 1e-71 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_0664 YP_002980637.1 hypothetical protein VFG1526 Protein 8e-75 55
Rpic12D_0664 YP_002980637.1 hypothetical protein VFG1615 Protein 2e-73 54
Rpic12D_0664 YP_002980637.1 hypothetical protein VFG1676 Protein 7e-72 53
Rpic12D_0664 YP_002980637.1 hypothetical protein VFG0658 Protein 3e-73 53