Gene Information

Name : Rpic12D_0633 (Rpic12D_0633)
Accession : YP_002980607.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 667672 - 668580 bp
Length : 909 bp
Strand : +
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A2330 LysR family transcriptional regulator

DNA sequence :
ATGAACTTACGCCATCTTCGCTGCTTCATCGCCGTAGCCGAGGAACTGCACTTCGGCCGGGCTGCTCGACGGCTGCACAT
CGAACAGTCTCCACTGTCGCGCACGATCCGCCAGATGGAGGCGGATTTAGGGGTGCCGCTGCTCAACCGCTTGCCACGCA
GTGTTCGTCTCACACCGGCGGGACAGGTCTTCCTCGAAGAAGCCCGGCGCGTACTGCTGGCCTTCGAGCAAGCGCAGACC
AAGGCACGCGCCGCAGCGAACCAGCGGAACACGCTGCGCATCGCACTATCTGGTGACATGGGGCAGGCCCGCTTGTCGGC
GTTGCTTGCGCTTTGCCGCGAGGAGGCACCACAGGTCGGCATTCGGATATTTGAAACGCCACTGGCGCAGTTGGTGACTG
GACTGCGCAACGACTTGTATGACGCAGGTTTTGCATTGGCTGGTGAAATGGACGCCGGCATCGTCGCCATGCCGGTGTGG
CGAGACCCGCTGGTGGTGGCTTTGCCCGCCAGGCATCCGCTGCTGGCTTTCAAGGAAGTGCCGCTGGAGGAAGTGGCGAG
CTATCCGCTGGTGCTGTGCGATCCCCAGGTCTGCGAAGGTTGCAGCCGGCAGCGCGAACGGCTGCTCCGCACGGTGGATG
CGCAGCCGACGGTAGCCGAGTACGTCAAGACCCATTCCCTGATGCTGGCCCTCGTGGCCGCCGGCTACGGCGTGGGCTTT
TCGAGCGCGGCGCATCTGGCGGGTTGCCATCAGGCCGATGTCGTCGTGCGGCCGCTGGCCGACGAGACCGCTTCGCTGAC
GACCTATCTACTGCGACCCGAAGGCGAAATCATGGAGCCGCTGCGGCAGTTCATCGACCGCGTGGAGCGTGTCGGACGCC
CGCAAGGCACCGATCAACGCCCGATGTGA

Protein sequence :
MNLRHLRCFIAVAEELHFGRAARRLHIEQSPLSRTIRQMEADLGVPLLNRLPRSVRLTPAGQVFLEEARRVLLAFEQAQT
KARAAANQRNTLRIALSGDMGQARLSALLALCREEAPQVGIRIFETPLAQLVTGLRNDLYDAGFALAGEMDAGIVAMPVW
RDPLVVALPARHPLLAFKEVPLEEVASYPLVLCDPQVCEGCSRQRERLLRTVDAQPTVAEYVKTHSLMLALVAAGYGVGF
SSAAHLAGCHQADVVVRPLADETASLTTYLLRPEGEIMEPLRQFIDRVERVGRPQGTDQRPM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 6e-72 52
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 3e-57 44