Gene Information

Name : Rpic12D_0613 (Rpic12D_0613)
Accession : YP_002980590.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : LysR family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0583
EC number : -
Position : 647666 - 648574 bp
Length : 909 bp
Strand : -
Note : PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A2328 LysR family transcriptional regulator

DNA sequence :
TTGGAACTCAGACTACTGCGCTATTTCGTTGCGGTCGCGGAAGAACTGCATTTCGCGCGAGCGGCCGAGCGCCTTGGCGT
AGAACAATCGCCTGTGTCGCGCGCAATGCGCAATCTCGAAGCCACGCTCGGCGTGCAGTTGTTCGACCGCAGCGCGCACC
AGACGCGACTGACCTGGGCCGGTCAAGTGTTCCTCGGTGAGTGCCGGCGTGTGCTGGCCACCGTGGAGCAGGCGGTGAGT
GCCGCAAAGGCGGCGGCGCAGGGCTATCAGGGTTATCTGCGCATCGCCATCTGCGACAGCTTGGCGCAGCCCCACATTGC
CACCTTGCTGGCGCGCAGCCGCGAGGAAGAGCCCGAACTGGAGATTCGCGTCTTCGAGCTGCCTTTCGCGCAGCAGCTCA
AGGGCCTGCACAACGATCTGCTGGACATCGGCTTTGCGCTGTCGGACGCGGTGAGCGAAGGCCTTGTCGCCGAGCCCGTG
TGGACCGATCCTCTGTCGGTGATCGTGCCCGTGCGCCACCCCTTGTTGGCGCACGCGGAAGTGCCATTGGATGAAGCCTT
GAAGTTTCCGTTGGTACTGTGCCATCCGGACGCGGGATCGGGCTGCCACCACCAGATCCAGGCGGTGCTTCAAGGTGCGT
CCAAGCCGCTCAAGCTGGTAGATCAGGTGACGAGCCTAGGCGTGATGCTGACTCTGGTCGGTGCCGGTTATGGCCTAGGT
TTCGCCATTGCCTCGCAGGTGCAGACCCTGAACCGCCCCGACATAACCGTTCGCCCCTTGGCCGGCACGCCGCCCATGCT
GTCTACCTACCTGCTGCGCCGCAGCGCCGAACCCTCTGAGCCCATGAAGCGGTTTCTGCAGCGCGCCCGCGAGGAGTTCC
TGCCAAAGGGAGATGAACCGGCCTCGTGA

Protein sequence :
MELRLLRYFVAVAEELHFARAAERLGVEQSPVSRAMRNLEATLGVQLFDRSAHQTRLTWAGQVFLGECRRVLATVEQAVS
AAKAAAQGYQGYLRIAICDSLAQPHIATLLARSREEEPELEIRVFELPFAQQLKGLHNDLLDIGFALSDAVSEGLVAEPV
WTDPLSVIVPVRHPLLAHAEVPLDEALKFPLVLCHPDAGSGCHHQIQAVLQGASKPLKLVDQVTSLGVMLTLVGAGYGLG
FAIASQVQTLNRPDITVRPLAGTPPMLSTYLLRRSAEPSEPMKRFLQRAREEFLPKGDEPAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 2e-64 52
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 3e-52 44