Gene Information

Name : Rpic12D_0539 (Rpic12D_0539)
Accession : YP_002980516.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Virulence
Product : family 2 glycosyl transferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 570657 - 571730 bp
Length : 1074 bp
Strand : -
Note : PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_0656 glycosyl transferase, family 2

DNA sequence :
ATGCAGCCGAATCATCAAGACCCACACGACGCGCCACTACTTTCCCTCGTCGCGCCGTTCTACAACGAAGGCGAAGCGCT
GCATCTGTTCTTCGCCCGCGTGGTCCCGATCCTCGAATCGATCGATGGCATGCAGTTCGAGATCGTGTGCGTAAACGACG
GCAGCGCCGACGACACGCTCCCCAAGCTCGTCGCCGTATCGCATGCTGACCCCCGCGTTCGTGTGGTCGACCTGACCCGC
AATTTCGGCAAGGAAGCGGCACTGACCGCCGGCCTGGACGAGGCACAGGGCGATGCCGTCATCCCCATCGATGCGGACCT
GCAAGACCCGCCGGAGCTGATCCCCACGCTGGTCGCGCACTGGCGCAAAGGCGCCGAAGTCGTGCTCGCACAGCGCGCCA
ACCGCGCATGCGATTCGTTCCTCAAGCGCGTGACAGCCGCCGCTTATTACCGCATCCACAATCGCCTGTCCGACCTGAAG
CTGCCTGAGAACGTGGGCGACTTCCGGCTGATGGACCGCGCCGTGGTCAACGCGCTCAAGCAACTGCCCGAGCGGCACCG
CTTCATGAAGGGCCTGTTTGCCTGGGTCGGTTTCAGCACGGTCATCGTGCAGTACGAGCGTGAGAAACGCAGCGCAGGCA
CGTCAAAGTTCTCCGGCTGGCGGCTGTGGAACTTCGCGCTGGAAGGCATCACGAGTTTCAGCACGCTGCCGTTGCGTAGC
TGGACGTATCTCGGTGCGCTCGTTGCTGCGCTGGCGTTCTGCTATGGCGCGTTCATCATCCTGCGCACGATGATCTTCGG
CGTGGTGGTGCCCGGCTACGCCTCGGAGCTGTCGCTGATGCTGTTCTTCGGCGGGCTGCAGATGATCGGCCTGGGAATGA
TCGGCGAATACGTCGGCCGCATCTATGACGAAGCGAAGGGCCGCCCCATCTACCTCGTCAAGCGCCGCTATCAGGAGCGG
CGCCCGCGCACCCGCGTACCGAGCATCAACAACCGGCAAGTCATTCCGATTGCCAGCGCTCGCCCGCGTCAGCCGCAAGG
AGAACGCCAGCGCAGCCATGCCGCACGGCGTTGA

Protein sequence :
MQPNHQDPHDAPLLSLVAPFYNEGEALHLFFARVVPILESIDGMQFEIVCVNDGSADDTLPKLVAVSHADPRVRVVDLTR
NFGKEAALTAGLDEAQGDAVIPIDADLQDPPELIPTLVAHWRKGAEVVLAQRANRACDSFLKRVTAAAYYRIHNRLSDLK
LPENVGDFRLMDRAVVNALKQLPERHRFMKGLFAWVGFSTVIVQYEREKRSAGTSKFSGWRLWNFALEGITSFSTLPLRS
WTYLGALVAALAFCYGAFIILRTMIFGVVVPGYASELSLMLFFGGLQMIGLGMIGEYVGRIYDEAKGRPIYLVKRRYQER
RPRTRVPSINNRQVIPIASARPRQPQGERQRSHAARR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 6e-70 55
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 1e-71 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_0539 YP_002980516.1 family 2 glycosyl transferase VFG0670 Protein 2e-70 55