Gene Information

Name : Rpic12D_0449 (Rpic12D_0449)
Accession : YP_002980427.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Resistance
Product : SSS sodium solute transporter superfamily protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG4147
EC number : -
Position : 474474 - 476204 bp
Length : 1731 bp
Strand : +
Note : TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B1980 Na+/solute symporter

DNA sequence :
ATGAAGAAGATGCTTTCGATCCTGCTGGTGGCGCTACTGGCCGCTGGCGCCTGCGGAGCGGCTCTGGCTGCCGGCGGCGA
TGTCGGACAGACCGCCAAGCAGGAAACCAACACCACGGCCATCGTTCTGTTTGCACTGTTTGTGGCCGGCACGCTGTGGA
TCACGAAGTGGGCGGCCAAGCGTACGCGCTCCGCGGCCGATTTCTACACGGCGGGCGGCGGCATCACCGGCTTCCAGAAT
GGCCTGGCCATTTCGGGCGACTACATGTCGGCAGCGTCCTTCCTCGGTATTTCCGCGGCCGTGATGACCTCCGGCTACGA
CGGCCTGATCTACTCCATCGGCTTTCTGGTCGGCTGGCCGATCATCACGTTCCTGATGGCCGAGCGGCTGCGCAATCTTG
GCAAGTTCACCTTTGCAGACGTGGCAGGCTACCGGTTCGAGCAAGGCCCGATCCGCAGCTTTGCCGCCGTTGGCACGCTG
GTGGTGGTGGCGTTCTATCTGATCGCTCAGATGGTGGGTGCAGGCCAGCTCATCAAACTGCTGTTCGGGCTGGATTACTG
GATCGCGGTGGTCATCGTCGGTGCGTTGATGATGGTCTACGTGCTCTTCGGCGGTATGACCGCAACCACCTGGGTGCAGA
TCATCAAGGCGTGCATGCTGCTGGCTGGCGTGACGTTCATGGCCATCATGGTGCTGGCGCAGTACGGTTTCAGTCTGGAG
GCGTTGTTCGCCAAGGCTGTGCAGGTCAAGACCGCCATTGCAGCCAATGCCGGCAAATCGCCCGATGAGGCCGCCAAGAT
CGGTCTGTCGGTGATGGCGCCGGGTGGCTTCATCAAGGATCCGATCTCGGCCATCTCGTTCGGCATGGCGCTGATGTTCG
GCACCGCCGGTCTGCCTCACATCCTGATGCGTTTCTTCACGGTGCCCGATGCCAAGGAAGCACGCAAATCGGTCTTCTGG
GCAACTACCTGGATCGGCTACTTCTACATCCTGATCTTTATCATCGGCTTTGGTGCGATCACGCTGGTGTTGACGAACCC
CGAACTGTCCGACGTGGCCAAGGGTGTCATCAAGGGCGGCGCGGGCACGGCCAACATGGCTGCGGTACTGGTGGCCAAGA
CTGTGGGCGGCGACGTGTTCTACGGCTTCATCTCGGCCGTGGCGTTTGCCACGATTCTCGCGGTGGTAGCAGGGCTCACG
CTGTCGGGTGCATCGGCGGTGTCGCATGATCTTTACGCCACGGTCTTCAAGCACGGCAAGGCCAACAGCGCCGACGAGCT
GAAGGTCTCGCGCATCACCACGCTGGTGCTGGGCGTGATCGCCGTGCTGCTGGGCATCGCTTTCGAGAAGCAGAACATCG
CGTTCATGGTGTCGCTGGCGTTTGCGGTGGCGGCATCGGCCAACTTTCCGGTGTTGTTCCTCTCGATGCTGTGGAAGGGC
TGTACCACGCGTGGTGCGGTTATCGGCGGGTTCCTGGGGCTGATCTCGTCAGTGGGTCTGACGATCGTTTCGCCGTCGGT
GTGGGAGGCCACGCTCGGCTATCCGAAGGGCTCGGCGTGGTTCCCGTACACGTCGCCCGCGCTGTTCTCGATGACGATCG
GCTTCGTGGGCGTGTGGCTGTTCTCGGTGCTGGACAGCAGCGTTCGCGCCAAGAACGAAAAGGCGTCGTTTGCCGCGCAA
CAGGTCCGCTCGGAAACGGGCCTCGGTGCGGCTGGCGCATCGGGCCACTGA

Protein sequence :
MKKMLSILLVALLAAGACGAALAAGGDVGQTAKQETNTTAIVLFALFVAGTLWITKWAAKRTRSAADFYTAGGGITGFQN
GLAISGDYMSAASFLGISAAVMTSGYDGLIYSIGFLVGWPIITFLMAERLRNLGKFTFADVAGYRFEQGPIRSFAAVGTL
VVVAFYLIAQMVGAGQLIKLLFGLDYWIAVVIVGALMMVYVLFGGMTATTWVQIIKACMLLAGVTFMAIMVLAQYGFSLE
ALFAKAVQVKTAIAANAGKSPDEAAKIGLSVMAPGGFIKDPISAISFGMALMFGTAGLPHILMRFFTVPDAKEARKSVFW
ATTWIGYFYILIFIIGFGAITLVLTNPELSDVAKGVIKGGAGTANMAAVLVAKTVGGDVFYGFISAVAFATILAVVAGLT
LSGASAVSHDLYATVFKHGKANSADELKVSRITTLVLGVIAVLLGIAFEKQNIAFMVSLAFAVAASANFPVLFLSMLWKG
CTTRGAVIGGFLGLISSVGLTIVSPSVWEATLGYPKGSAWFPYTSPALFSMTIGFVGVWLFSVLDSSVRAKNEKASFAAQ
QVRSETGLGAAGASGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAK01502.1 putative amino acid transport protein Not tested PAGI-1 Protein 8e-116 55
cur_1523 YP_001800917.1 transporter Not tested Not named Protein 2e-74 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Rpic12D_0449 YP_002980427.1 SSS sodium solute transporter superfamily protein BAC0564 Protein 6e-138 64
Rpic12D_0449 YP_002980427.1 SSS sodium solute transporter superfamily protein BAC0570 Protein 1e-127 61