Gene Information

Name : Rpic12D_0042 (Rpic12D_0042)
Accession : YP_002980026.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 46363 - 47271 bp
Length : 909 bp
Strand : +
Note : PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0151 transmembrane protein

DNA sequence : 
ATGCAGTTCAACCGCCTGGCGCTCATGTTGGCTACCGCTGCGGCACCCGTTCTGTGGGGCACGACATATCTGGTGTTCAC
GCAAACGCTGCCCGTTGGTCACCCGTTGCTGGTCGGCGCGCTGCGTGCGCTCCCGGCAGGGGTGCTGCTCATGCTTCTCG
GCCCGGGCCTGCCGCCGCGTAGCAAGTTGCTTCCCTTGCTGTTTCTCGGGCTGGCGAATATCGGCGTGTTCTTCGCGCTC
TTGTTCTTGGCGGCGCAGCGCCTGCCAGGTGGCGTGGCAGCGACGATCATGTCGGCGCAACCGCTGGTGGTGGCGCTGCT
GGCGTGGCCCCTGCTGGCGCGCAAGCCGCGTCCGGCGCAACTGGCGGCAGCGCTGGCAGGGTCGATGGGGGTGGGGCTGC
TGATTCTCGGCCCCGCGGCCAGGCTCGATGCGATTGGTGTGGCGGCAGCCCTGGCCGCTGCGTTTTCGATGGCGATGGGC
ACCGTGCTCATTGAACGCTGGGGCCGAATCGGCACGCCGCTGGCGGTGGCTGCCTGGCAGCTCGCGCTGGGCGGGCTGGT
GCTGCTGCCGGTGGCGCTGTGTGTGGAAGGTTTGCCGCCCATGCTCACAGCGCGCAACGCGGTGGGCTTCGCTTACCTTA
TCGTCATCGGCACGGCGTTGGGCTACTGGCTGTGGGTGCGCGGTATCGGCGTGCTGGGCGCAGACGTGACGTTCCTGTCG
CTGCTCAGCCCGCTGACGGCGACAGTGCTCGGCGCGCTGGTCCTGGGCGAGTGGTTCAGCCCGATGCAGACGGGCGGCGC
GGTGCTGATCCTGGGCGCAACGGTGGCGGGGATGGCGTTGTCGCGGCGGGCACGGCGAGAGCCCGCAGTGCAGCGTCCTG
GCTCAAGCGAGCAGCTGCAGCCGCATTGA

Protein sequence : 
MQFNRLALMLATAAAPVLWGTTYLVFTQTLPVGHPLLVGALRALPAGVLLMLLGPGLPPRSKLLPLLFLGLANIGVFFAL
LFLAAQRLPGGVAATIMSAQPLVVALLAWPLLARKPRPAQLAAALAGSMGVGLLILGPAARLDAIGVAAALAAAFSMAMG
TVLIERWGRIGTPLAVAAWQLALGGLVLLPVALCVEGLPPMLTARNAVGFAYLIVIGTALGYWLWVRGIGVLGADVTFLS
LLSPLTATVLGALVLGEWFSPMQTGGAVLILGATVAGMALSRRARREPAVQRPGSSEQLQPH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pecM ACN81012.1 PecM Not tested AbaR5 Protein 8e-08 46
pecM CAJ77067.1 Regulatory protein Not tested AbaR1 Protein 6e-08 46
pecM AGK07028.1 PecM Not tested SGI1 Protein 6e-08 46
pecM AGK07086.1 PecM Not tested SGI1 Protein 6e-08 46