Gene Information

Name : Rpic12D_3382 (Rpic12D_3382)
Accession : YP_002983318.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 3572014 - 3573321 bp
Length : 1308 bp
Strand : +
Note : PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rso:RSc0045 hypothetical protein

DNA sequence :
ATGTCCCGTCCGCTTCCTGTTACCGTGCTGTCCGGCTTTCTGGGCGCCGGCAAGACCACGCTGCTCAACCACGTGCTCGC
CAACCGCGAGGGCAAGCGTGTGGCCGTGATCGTCAATGACCTGTCGGACGTCAACATCGACGCGCAGCTCGTGGGCGATG
GCACAGCCACCAGTGCGCAGCTCTCGCGCACTGACGAGCGCATGGTGGAGCTGTCCAACGGCTGCATCTGCTGCACGCTG
CGCGAAGATCTGCTCGACGAGATCGCGCGCTTGGCTCGCGAAGACCGCTTCGACTACCTGCTGATCGAATCGACCGGCGT
GGCCGAGCCGCTGCCGATTGCCGAGACGTTTACGTTTGAAGACGCTGAAGGCGACGTGCTGTCCGACCTCGCGCGCCTGG
ACACCATGGTCACCGTGGTTGATGCGCAGCACTTTCTGGCCGACTACGACGCTGCGGATTTTTTGTCCGATCGCGGCCAG
GCGCGTGATGAAGACGACGATCGCACCGTCGTCGACTTGCTGATCGAACAGGTGGAGTTTTGCGACGTGATCGTGCTCAA
CAAGATCGATCTCGTGAGCGATGCCGAGCGCGAGCGCCTGGCAGGCATCCTGCATTCATTGAACCCGCGCGCGCGCATCG
TGCCGGCATCGTTCGGCAAGGTGCCGCTGGACGAAATTCTCAATACGCATCGCTTTGATTTCGATGCCGCGTCTGCAGCC
CCGGCGTGGCTGGCCGAGTTGCGCGGCGAACACGTTCCCGAGACCGAAGCGCTCGGCATTCGAAGCTTTGTCTATCGCCG
CCGCGTGGCATTCCACCCGCAGCGCCTGTGGGATCTGATGCACACCGAATGGCTGCGCGAACACGGCCGCGTGCTGCGCT
CGAAAGGCTATTTCTGGCTGGCCTCGCGCATGGACACGGCGGGCAGCTGGGGCCAGGCCGGCGGCGTGATGCGCCATGGC
GGCGCCGGCGCATGGTGGGCTGCGGTGGATGAAGCCGAGTGGCCCGACGAGGAAGAAGCCCGCGCAGACATCCAGGACAA
GATGCACGACAACGGTGCGCCCGCGCAGTGGGGCGACCGCCGTCAGGAACTGGTCTTCATTGGCACGGACCTGGATGAAG
CCGCGCTCATCGCGCAGCTCGACACCTGCCTGCTGACCGATGCGGAGATGGCAGCCGGACCCGAAGCGTGGGCCGCGCTG
CCCGATCCGTTCCCCGCGTGGGCCTACGACGACCATGACGATGAGGACGGCGACGACGACCCCGACCACCAACACGGTGA
CGACTGCGACTGCGGGCACCATCACTGA

Protein sequence :
MSRPLPVTVLSGFLGAGKTTLLNHVLANREGKRVAVIVNDLSDVNIDAQLVGDGTATSAQLSRTDERMVELSNGCICCTL
REDLLDEIARLAREDRFDYLLIESTGVAEPLPIAETFTFEDAEGDVLSDLARLDTMVTVVDAQHFLADYDAADFLSDRGQ
ARDEDDDRTVVDLLIEQVEFCDVIVLNKIDLVSDAERERLAGILHSLNPRARIVPASFGKVPLDEILNTHRFDFDAASAA
PAWLAELRGEHVPETEALGIRSFVYRRRVAFHPQRLWDLMHTEWLREHGRVLRSKGYFWLASRMDTAGSWGQAGGVMRHG
GAGAWWAAVDEAEWPDEEEARADIQDKMHDNGAPAQWGDRRQELVFIGTDLDEAALIAQLDTCLLTDAEMAAGPEAWAAL
PDPFPAWAYDDHDDEDGDDDPDHQHGDDCDCGHHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 6e-81 50
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-81 50