Gene Information

Name : Rpic12D_3142 (Rpic12D_3142)
Accession : YP_002983081.1
Strain :
Genome accession: NC_012856
Putative virulence/resistance : Unknown
Product : transposase mutator type
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 3308740 - 3309990 bp
Length : 1251 bp
Strand : +
Note : PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein

DNA sequence :
ATGCCACGCAAACCGAAAGCCAAGCCGGCGGACCTGCCGGCGATCCCTGCCGAACTGCTTGAGCAGTTCGGCAGCGGCCC
GATGACGGCCGAAGCCATCAACGCGGCGACCCTGGCCCTCAAGAAGGCCCTGATCGAACGGGCGCTGGGCGGCGAGATGA
ATCACCATCTGGGCTACCCGCCAGGTGCGTCCAAGCCGGCCACGGTGAGCAATCAGCGCAACGGCACGGGCGCCAAGACG
GTGCTGACCGAGGGCGGCCCGATCCGCATCGAGGTACCGCGCGACCGTGACGGCAGCTTCGCGCCGCTGCTCATCCCCAA
ACACGAACGACGCTTCAAGGGCTTCGACGACAAGATCGTCGCCATGTATGCCCGGGGCATGACCGTGCGCGAGATCCAGG
GCTTCCTGCTGGAGCAATATGCGACGGACGTCTCGCCTGAGTTCATCAGCTCGGTCACCGACGAGGTGATGGCCGAAGTC
ACCGCCTGGCAGGCCCGGCCGCTCGATCCCATGTACCCGGTGGTGTTCTTCGACGCGCTGCGGGTCAAGATCCGGGAGGA
TGCCGTGGTGCGCAACAAGGCCGTCTATCTGGCGCTGGGGGTTCTGCCCGACGGCACGCGTGACATCCTGGGCCTGTGGA
TCGAGAACACCGAGGGTGCCAAGTTCTGGATGAAGGTGTTCAACGATCTCAAGACGCGCGGCGTGAACGACATCCTGATC
GCCGTGACCGACGGCCTCAAGGGCATGCCCGAGGCGCTGGCAGCTGTGTTCCCCGCGACCACGCTGCAGACCTGCATCGT
CCACCTGATCCGCAACAGCCTCGATTACGCGAGCTGGAAGGACCGTCGTGCGCTGGCGGCCGCGATCAGGCCGATCTACA
CAGCCCCGAGCGCAGAGGCCGCGCAGGCCGAGCTTGAGGCGTTTGCCGACGGCCCGTGGGGGCAGCGATACCCCACCGTC
AGTGCCGCCTGGCGCAACGCCTGGGATCGCGTGATTCCGTTCTTTGCGTTCCCGCCGGCGGTACGCAAGGTGATTTACAC
GACGAACGCCATCGAGAACATCAACGCCCAACTACGCAAGATCATCAAGACCCGTGGCCACTTCCCGAGCGACGAAGCAG
CAACAAAACTCATCTGGCTGGCACTGCGCAACATCACGGCCGGTTGGAGCCGTGCCGCTCACGACTGGAAGCAGGCGATG
AACCAGTTCGCTATCCTCTACGCGGATCGATTCGTTCGACCGTCCGTGTGA

Protein sequence :
MPRKPKAKPADLPAIPAELLEQFGSGPMTAEAINAATLALKKALIERALGGEMNHHLGYPPGASKPATVSNQRNGTGAKT
VLTEGGPIRIEVPRDRDGSFAPLLIPKHERRFKGFDDKIVAMYARGMTVREIQGFLLEQYATDVSPEFISSVTDEVMAEV
TAWQARPLDPMYPVVFFDALRVKIREDAVVRNKAVYLALGVLPDGTRDILGLWIENTEGAKFWMKVFNDLKTRGVNDILI
AVTDGLKGMPEALAAVFPATTLQTCIVHLIRNSLDYASWKDRRALAAAIRPIYTAPSAEAAQAELEAFADGPWGQRYPTV
SAAWRNAWDRVIPFFAFPPAVRKVIYTTNAIENINAQLRKIIKTRGHFPSDEAATKLIWLALRNITAGWSRAAHDWKQAM
NQFAILYADRFVRPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 4e-85 46
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-92 45
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 1e-82 44
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 4e-81 44
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 2e-79 43